Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 OR11H5P-201ENST00000554039 926 ntBASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 MIR3922-201ENST00000585192 84 ntBASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 AC024220.1-201ENST00000603675 484 ntBASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 AC087045.1-201ENST00000605856 382 ntBASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 U3.45-201ENST00000607547 219 ntBASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL4A3BPQ9Y5P4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 AC073073.2-201ENST00000609827 2578 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 Y_RNA.157-201ENST00000363638 102 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 MIR7-3-201ENST00000384898 110 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 AL365496.1-201ENST00000426885 215 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 AC006989.1-201ENST00000427212 131 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 SRIP2-201ENST00000428470 166 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 MTND1P2-201ENST00000430604 821 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 NFU1P2-201ENST00000448700 469 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 RNU6-1208P-201ENST00000459588 107 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 AL117351.2-201ENST00000513571 157 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 RNU6-579P-201ENST00000516879 102 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 AC069113.1-201ENST00000517763 267 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 AC025281.1-201ENST00000567026 265 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 AL451007.1-201ENST00000595491 289 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 AC006077.1-201ENST00000604746 343 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 RNU6-89P-201ENST00000606519 100 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 RMST_3.1-201ENST00000611651 109 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 MIR6134-201ENST00000617606 109 ntBASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.01□□□□□ -1.77
COL4A3BPQ9Y5P4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 CD24P4-201ENST00000382840 243 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 MIR218-2-201ENST00000385006 110 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 RNA5SP219-201ENST00000390940 113 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 POLHP1-201ENST00000411806 470 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 AL592148.1-201ENST00000413568 445 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 AC096649.2-201ENST00000416186 393 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 AL645937.1-202ENST00000421799 937 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 AC002075.2-201ENST00000425207 252 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 CYCSP4-201ENST00000429682 331 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 NIPA2P5-201ENST00000452282 464 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 DYNLL1P5-201ENST00000467158 270 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 RPS29P25-201ENST00000481709 171 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 AC110768.1-201ENST00000509222 400 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 AC021739.1-201ENST00000559631 174 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 AC005498.1-201ENST00000592125 465 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 AC092747.3-201ENST00000603769 301 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 AC019176.2-201ENST00000611579 315 ntBASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL4A3BPQ9Y5P4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 AC093536.2-201ENST00000565257 1406 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 RNA5SP42-201ENST00000364278 115 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 RPLP0P7-201ENST00000416050 667 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 AC009161.1-201ENST00000417306 376 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 RPS29P31-201ENST00000446147 164 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 RPL21P23-201ENST00000446654 460 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 AC113155.1-201ENST00000511141 769 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 RNU1-86P-201ENST00000516108 154 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 RNU1-107P-201ENST00000516617 154 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 CYCSP27-201ENST00000527643 293 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 AC090115.3-201ENST00000553218 849 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 AC092807.2-201ENST00000609367 243 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 AC069200.1-201ENST00000609511 323 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 AC103705.1-201ENST00000619013 241 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 AC012314.7-201ENST00000619693 93 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.99□□□□□ -1.77
COL4A3BPQ9Y5P4 SCARNA4-202ENST00000625402 129 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms