Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC012409.4-201ENST00000612923 249 ntBASIC3.28□□□□□ -1.88
RAI2Q9Y5P3 AP001486.3-201ENST00000615334 372 ntBASIC3.28□□□□□ -1.88
RAI2Q9Y5P3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.28□□□□□ -1.88
RAI2Q9Y5P3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.28□□□□□ -1.88
RAI2Q9Y5P3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RAI2Q9Y5P3 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.28□□□□□ -1.89
RAI2Q9Y5P3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 MIR422A-201ENST00000362286 90 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 RNU6-797P-201ENST00000363101 109 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 Y_RNA.279-201ENST00000364763 95 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 RNU6-767P-201ENST00000384132 107 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 SNORA36C-201ENST00000384289 132 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AL357075.1-201ENST00000404107 726 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AL162578.1-201ENST00000406202 378 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 RNU4-26P-201ENST00000410270 107 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 ARL5AP1-201ENST00000418991 388 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 ERLEC1P1-201ENST00000433806 578 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 HMGB1P18-201ENST00000438801 619 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AC093019.1-201ENST00000443135 252 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 MTND3P16-201ENST00000452205 344 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AC078817.1-201ENST00000492623 435 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AC110794.1-201ENST00000505816 425 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 RNU6-123P-201ENST00000516163 102 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 RN7SKP258-201ENST00000517151 304 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 MTND4P7-201ENST00000523876 130 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AC243972.3-201ENST00000539655 198 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AC005951.2-201ENST00000576282 495 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 MIR3162-201ENST00000581818 82 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 MIR4435-1-201ENST00000582552 80 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AC002545.1-201ENST00000592511 181 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 DPPA3P3-201ENST00000603842 430 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AL138889.2-201ENST00000603883 242 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AC009994.1-201ENST00000606889 253 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AC093732.2-201ENST00000607950 274 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AL365204.3-201ENST00000612448 685 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AL359547.2-201ENST00000615810 418 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 uc_338.34-201ENST00000617467 174 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 AC104985.2-201ENST00000620598 500 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 MIR7843-201ENST00000622274 79 ntBASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RAI2Q9Y5P3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AC073544.1-201ENST00000600110 1595 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 RNU6-288P-201ENST00000363690 104 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 RNA5SP189-201ENST00000364920 115 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 RNU6-116P-201ENST00000384042 109 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 SNORA32.2-201ENST00000384049 122 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 MIR1290-201ENST00000408735 78 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 RNA5SP31-201ENST00000411144 127 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 RN7SKP140-201ENST00000411196 284 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 RPL31P12-201ENST00000422587 358 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 RPL7P46-201ENST00000425129 740 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 MTND3P23-201ENST00000431980 347 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 RPL7P12-201ENST00000446719 750 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AL118520.1-201ENST00000450770 291 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AC006539.3-201ENST00000454258 129 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 RPL23AP11-201ENST00000475260 469 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 RPS4XP22-201ENST00000480755 780 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 RPL39P36-201ENST00000490784 156 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 HMGN1P12-201ENST00000499125 195 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AC091951.2-201ENST00000500762 203 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 MTCO2P30-201ENST00000503662 364 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AC091885.1-201ENST00000506658 268 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 RNU6-875P-201ENST00000516488 106 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AC022690.1-201ENST00000526681 550 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AP005435.4-201ENST00000529514 284 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 MED28P6-201ENST00000558776 231 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 MIR3921-201ENST00000577308 85 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 MIR2682-201ENST00000580305 110 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AC007619.2-201ENST00000605743 379 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 AL355810.1-201ENST00000614629 552 ntBASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
RAI2Q9Y5P3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms