| PHLDA3 | Q9Y5J5 | AC010378.1-201 | ENST00000619270 | 362 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| PHLDA3 | Q9Y5J5 | DYNC2H1-203 | ENST00000398093 | 12945 nt | APPRIS P3 TSL 5 BASIC | 1.47 | □□□□□ -2.17 | | |
| PHLDA3 | Q9Y5J5 | XRCC4-205 | ENST00000511817 | 1636 nt | APPRIS P4 TSL 1 (best) BASIC | 1.47 | □□□□□ -2.17 | | |
| PHLDA3 | Q9Y5J5 | KPNA2P1-201 | ENST00000458289 | 1591 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| PHLDA3 | Q9Y5J5 | LMBRD1-201 | ENST00000370570 | 2099 nt | TSL 1 (best) BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | RNA5SP289-201 | ENST00000362332 | 137 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | RNU6-433P-201 | ENST00000363216 | 104 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | RNU4-92P-201 | ENST00000363783 | 136 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | SNORA4.1-201 | ENST00000364263 | 144 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | RNU4-68P-201 | ENST00000364314 | 141 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | U3.12-201 | ENST00000364498 | 214 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | RNU6-723P-201 | ENST00000383973 | 107 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | RNU6-701P-201 | ENST00000384059 | 107 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | MIR95-201 | ENST00000385072 | 81 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AL445529.1-201 | ENST00000398713 | 389 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | EDDM3CP-201 | ENST00000415977 | 425 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | VPS26BP1-201 | ENST00000417155 | 755 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AL353612.1-201 | ENST00000428769 | 465 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AL592045.1-201 | ENST00000429867 | 352 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC017048.2-201 | ENST00000431455 | 822 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | UBE2FP3-201 | ENST00000436366 | 524 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC007003.1-202 | ENST00000439318 | 349 nt | TSL 5 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | RPS15AP9-201 | ENST00000439856 | 381 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC073174.1-201 | ENST00000444155 | 415 nt | TSL 5 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | PSPHP1-201 | ENST00000450062 | 261 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC005538.1-201 | ENST00000455991 | 594 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AF129075.1-201 | ENST00000457162 | 794 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | LINC01995-201 | ENST00000489016 | 621 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | CFLAR-225 | ENST00000494258 | 693 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC008413.1-201 | ENST00000511864 | 177 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | MIR514B-201 | ENST00000516774 | 80 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC113145.1-201 | ENST00000522408 | 412 nt | TSL 5 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | DEUP1-203 | ENST00000527307 | 767 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AP000907.2-201 | ENST00000530827 | 353 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | MYL12A-202 | ENST00000536605 | 899 nt | APPRIS P1 TSL 1 (best) BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | IAPP-204 | ENST00000539393 | 409 nt | APPRIS P1 TSL 2 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC010196.1-201 | ENST00000550014 | 450 nt | TSL 5 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | MTCYBP23-201 | ENST00000558717 | 1102 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | FAM96A-206 | ENST00000559950 | 561 nt | TSL 2 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC026464.5-201 | ENST00000562497 | 722 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | MYL12A-209 | ENST00000580887 | 899 nt | TSL 1 (best) BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC008749.1-201 | ENST00000597650 | 306 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC020910.1-201 | ENST00000599404 | 413 nt | TSL 5 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC104763.2-201 | ENST00000604179 | 382 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC007363.1-201 | ENST00000604736 | 620 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AL355297.2-201 | ENST00000604792 | 129 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC090970.3-201 | ENST00000612566 | 866 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | C8orf59-209 | ENST00000612977 | 586 nt | APPRIS P1 TSL 2 BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | MIR5739-201 | ENST00000619803 | 80 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AL049777.1-201 | ENST00000622740 | 518 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AL356596.1-201 | ENST00000624230 | 379 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | THOC2-216 | ENST00000491737 | 4452 nt | TSL 5 BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | TEX21P-201 | ENST00000447107 | 1476 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | RNU6-1280P-201 | ENST00000365211 | 107 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AL390198.1-201 | ENST00000376445 | 320 nt | TSL 2 BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | RNU6-817P-201 | ENST00000391083 | 104 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | SUMO2P12-201 | ENST00000405924 | 140 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | RNU4-53P-201 | ENST00000410828 | 140 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | EIF1AXP1-201 | ENST00000419267 | 435 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AL589946.1-201 | ENST00000421465 | 420 nt | TSL 3 BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AL391336.1-201 | ENST00000424678 | 484 nt | TSL 3 BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | ANKRD10-IT1-201 | ENST00000426991 | 800 nt | TSL 2 BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | TIMM9P1-201 | ENST00000436122 | 256 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | NEFMP1-201 | ENST00000443423 | 1006 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | CHODL-AS1-201 | ENST00000447175 | 1117 nt | TSL 2 BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC093110.1-201 | ENST00000456363 | 602 nt | TSL 2 BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AL441985.1-201 | ENST00000457727 | 251 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AL137847.2-201 | ENST00000458111 | 527 nt | TSL 3 BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AP001486.1-201 | ENST00000463339 | 476 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | RPL23AP41-201 | ENST00000484754 | 458 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC107032.1-201 | ENST00000485945 | 480 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC134050.1-201 | ENST00000495088 | 933 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC097478.1-204 | ENST00000509723 | 547 nt | TSL 3 BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | CD44-AS1-201 | ENST00000528869 | 587 nt | TSL 4 BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AP003498.1-201 | ENST00000532530 | 347 nt | TSL 3 BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AP002770.2-201 | ENST00000543613 | 532 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | LINC00933-203 | ENST00000559812 | 219 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC233702.2-202 | ENST00000562547 | 291 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC009063.1-201 | ENST00000563342 | 702 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | MIR4448-201 | ENST00000584360 | 86 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC007229.1-201 | ENST00000590455 | 412 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | BNIP3P9-201 | ENST00000603714 | 553 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC079610.3-201 | ENST00000606960 | 147 nt | TSL 3 BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC034229.4-201 | ENST00000607861 | 441 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | uc_338.20-201 | ENST00000621563 | 178 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AP002371.2-201 | ENST00000624450 | 503 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC091965.5-201 | ENST00000624785 | 342 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | SCARNA15.3-201 | ENST00000626315 | 122 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | SCARNA4.1-201 | ENST00000628597 | 123 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC006020.1-201 | ENST00000420179 | 1854 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | PCDH11Y-203 | ENST00000362095 | 4220 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.45 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC107029.2-201 | ENST00000462011 | 2305 nt | TSL 2 BASIC | 1.44 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | CCDC82-202 | ENST00000423339 | 1878 nt | APPRIS P2 TSL 1 (best) BASIC | 1.44 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | MDM2-207 | ENST00000360430 | 891 nt | TSL 1 (best) BASIC | 1.44 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | RNA5SP240-201 | ENST00000365355 | 128 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | KIF27-203 | ENST00000376347 | 1030 nt | TSL 5 BASIC | 1.44 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | MIR518D-201 | ENST00000385014 | 87 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | MORN2-203 | ENST00000409131 | 544 nt | TSL 5 BASIC | 1.44 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | AC078974.1-201 | ENST00000411597 | 223 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| PHLDA3 | Q9Y5J5 | RPS12P24-201 | ENST00000412619 | 387 nt | BASIC | 1.44 | □□□□□ -2.18 | | |