Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RPS26P45-201ENST00000471748 340 ntBASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 TRBV5-2-201ENST00000489095 273 ntBASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 RN7SL346P-201ENST00000491561 294 ntBASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 MIR3921-201ENST00000577308 85 ntBASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 MIR4505-201ENST00000582238 73 ntBASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.65□□□□□ -1.5
PCDHGA4Q9Y5G9 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHGA4Q9Y5G9 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PCDHGA4Q9Y5G9 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 RNU6-766P-201ENST00000362478 107 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 RNU6-799P-201ENST00000363567 107 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 SNORA18.3-201ENST00000384122 132 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 AL357515.1-201ENST00000402967 542 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 U6atac.2-201ENST00000408644 118 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 AC245028.1-201ENST00000423259 256 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 KRT8P51-201ENST00000438938 274 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 HMGB1P37-201ENST00000439613 609 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 RN7SKP19-201ENST00000516016 252 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 AP006245.2-201ENST00000522004 300 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 AC091178.2-201ENST00000584401 117 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 AC020895.1-201ENST00000595362 272 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 AL031274.2-201ENST00000599419 203 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 AC062037.1-201ENST00000605302 128 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 AC126915.2-201ENST00000610957 190 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 AL139099.4-201ENST00000614802 114 ntBASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA4Q9Y5G9 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 AC022336.2-201ENST00000568966 2538 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 RNA5SP46-201ENST00000362370 120 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 RNU1-19P-201ENST00000363306 165 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 RNA5SP500-201ENST00000364486 119 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 Z98749.2-208ENST00000381646 500 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 MIR518D-201ENST00000385014 87 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 AL078599.1-201ENST00000402075 293 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 MIR320B2-201ENST00000408479 138 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 EDDM3CP-201ENST00000415977 425 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 SNRPEP9-201ENST00000436794 238 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 RNU6-107P-201ENST00000516643 102 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 RNU6-1183P-201ENST00000517054 60 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 AC044860.2-201ENST00000561005 179 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 AC025521.1-201ENST00000621624 286 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 AL133383.2-201ENST00000622958 2336 ntBASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA4Q9Y5G9 AC073073.2-201ENST00000609827 2578 ntBASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 Y_RNA.310-201ENST00000365063 113 ntBASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 RNU6-1336P-201ENST00000383886 109 ntBASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 MIR549A-201ENST00000385268 96 ntBASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 AC244670.1-201ENST00000436879 112 ntBASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 NIP7P2-201ENST00000485801 544 ntBASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 MLLT10P2-201ENST00000506434 249 ntBASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 RNU6-781P-201ENST00000516377 101 ntBASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 MIR2117-201ENST00000516780 80 ntBASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 AC093331.1-201ENST00000521474 169 ntBASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA4Q9Y5G9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms