Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 MIR3672-201ENST00000584290 82 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 MIR3922-201ENST00000585192 84 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 MIR3942-201ENST00000585264 109 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AC073539.2-201ENST00000597113 165 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AC113139.1-201ENST00000605049 239 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AL110115.1-201ENST00000614396 364 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 AC073346.2-201ENST00000624724 2058 ntBASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHB1Q9Y5F3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 RNU6-1252P-201ENST00000363054 104 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 RNA5SP322-201ENST00000363617 119 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 RNU6-128P-201ENST00000383976 107 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 RNU6-1179P-201ENST00000384667 107 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 MIR1302-11-201ENST00000408051 138 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 MIR1302-9-201ENST00000408365 138 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 MIR1302-10-201ENST00000408734 138 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 RNU6-1025P-201ENST00000410629 104 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 RNU2-68P-201ENST00000410878 191 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 RNU6-607P-201ENST00000411283 108 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 MTCYBP6-201ENST00000441810 138 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 HMGN2P16-201ENST00000456802 261 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 HMGN1P11-201ENST00000508668 303 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 RAC1P2-201ENST00000511164 579 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 SNORA70.14-201ENST00000516205 110 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 RNU6-566P-201ENST00000516790 107 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 MTCO3P13-201ENST00000577757 781 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 MIR4644-201ENST00000579929 84 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 MIR5692C1-201ENST00000585309 91 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 AC023043.2-201ENST00000589678 1026 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 AC136601.2-201ENST00000604356 474 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 BRDTP1-201ENST00000605735 677 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 HMGB1P50-201ENST00000605814 607 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 MIR1302-2-201ENST00000607096 138 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 U3.45-201ENST00000607547 219 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 PART1_1.1-201ENST00000611761 217 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 AL031601.2-202ENST00000622650 282 ntBASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PCDHB1Q9Y5F3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 MIR412-201ENST00000362142 91 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 Y_RNA.162-201ENST00000363683 102 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 RNA5SP72-201ENST00000364442 117 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 Y_RNA.387-201ENST00000383918 102 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 MIR1183-201ENST00000408856 89 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AC074085.1-201ENST00000413598 418 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 RPL21P109-201ENST00000422213 475 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AL139247.1-201ENST00000422768 325 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AL591419.1-201ENST00000427423 339 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AC005534.2-201ENST00000431047 433 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 SNAP23P1-201ENST00000433229 246 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AC107399.1-201ENST00000451226 265 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 CECR9-201ENST00000453421 199 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 Y_RNA.632-201ENST00000459189 102 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AC084357.1-201ENST00000473404 255 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 RPL21P13-201ENST00000488305 481 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AC022493.1-201ENST00000492984 337 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 MTND3P25-201ENST00000509243 135 ntBASIC3.75□□□□□ -1.81
PCDHB1Q9Y5F3 RN7SKP13-201ENST00000515933 244 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms