Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 RNU6-677P-201ENST00000516914 101 ntBASIC3□□□□□ -1.93
YIPF1Q9Y548 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3□□□□□ -1.93
YIPF1Q9Y548 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3□□□□□ -1.93
YIPF1Q9Y548 AC104383.1-201ENST00000530297 370 ntBASIC3□□□□□ -1.93
YIPF1Q9Y548 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3□□□□□ -1.93
YIPF1Q9Y548 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3□□□□□ -1.93
YIPF1Q9Y548 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3□□□□□ -1.93
YIPF1Q9Y548 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3□□□□□ -1.93
YIPF1Q9Y548 MIR4298-201ENST00000584380 73 ntBASIC3□□□□□ -1.93
YIPF1Q9Y548 AC008752.3-201ENST00000588113 712 ntBASIC3□□□□□ -1.93
YIPF1Q9Y548 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3□□□□□ -1.93
YIPF1Q9Y548 AC174048.1-201ENST00000603389 144 ntBASIC3□□□□□ -1.93
YIPF1Q9Y548 AC098826.3-201ENST00000603823 466 ntBASIC3□□□□□ -1.93
YIPF1Q9Y548 AP001330.5-201ENST00000607176 411 ntBASIC3□□□□□ -1.93
YIPF1Q9Y548 AC092794.1-201ENST00000612734 582 ntBASIC3□□□□□ -1.93
YIPF1Q9Y548 U4.5-201ENST00000617137 123 ntBASIC3□□□□□ -1.93
YIPF1Q9Y548 AC011155.2-201ENST00000623202 216 ntBASIC3□□□□□ -1.93
YIPF1Q9Y548 AC027309.3-201ENST00000623419 351 ntBASIC3□□□□□ -1.93
YIPF1Q9Y548 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3□□□□□ -1.93
YIPF1Q9Y548 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3□□□□□ -1.93
YIPF1Q9Y548 AC110774.1-201ENST00000623567 2018 ntBASIC3□□□□□ -1.93
YIPF1Q9Y548 CUL1P1-201ENST00000509510 2425 ntBASIC3□□□□□ -1.93
YIPF1Q9Y548 AL079305.1-201ENST00000623159 3008 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 RNU6-741P-201ENST00000383889 107 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 RNU6-606P-201ENST00000384721 111 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 Y_RNA.576-201ENST00000384781 102 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 RNU6-817P-201ENST00000391083 104 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 FAT1P1-201ENST00000406588 507 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 RNU2-33P-201ENST00000410344 192 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 MRPL50P2-201ENST00000416821 482 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 MTCO3P30-201ENST00000426425 670 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AL591212.2-201ENST00000433923 257 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AL512844.2-201ENST00000433990 593 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 FDX1P2-201ENST00000450769 375 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AL162395.1-201ENST00000457882 422 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 RNU7-182P-201ENST00000459009 62 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AP002884.2-201ENST00000471647 395 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AC126182.1-201ENST00000478134 357 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 RPL39P36-201ENST00000490784 156 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 RNU6-123P-201ENST00000516163 102 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 Y_RNA.693-201ENST00000516641 110 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 MTND4LP26-201ENST00000518144 282 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 TRAV28-201ENST00000557548 323 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AC027807.1-201ENST00000559921 996 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 HMGB1P33-201ENST00000563485 527 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 MTATP6P3-201ENST00000581686 676 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AC008521.1-201ENST00000587471 187 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AC025165.5-201ENST00000602802 578 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AL161798.1-201ENST00000604630 131 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AC008962.1-201ENST00000605729 304 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AC022893.3-201ENST00000607665 437 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 AL354950.2-201ENST00000617939 290 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 U6.114-201ENST00000636407 96 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.99□□□□□ -1.93
YIPF1Q9Y548 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
YIPF1Q9Y548 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.98□□□□□ -1.93
YIPF1Q9Y548 AL049641.1-201ENST00000441055 1948 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 AL136360.1-201ENST00000503377 1900 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 RNU6-1090P-201ENST00000364065 94 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 RNU4-12P-201ENST00000365233 139 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 RNU6-483P-201ENST00000384088 108 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 RNU6-190P-201ENST00000384154 102 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
YIPF1Q9Y548 RNA5SP293-201ENST00000410527 113 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.98□□□□□ -1.93
YIPF1Q9Y548 AL109913.1-201ENST00000421173 514 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 AC092047.1-201ENST00000424997 240 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.98□□□□□ -1.93
YIPF1Q9Y548 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.98□□□□□ -1.93
YIPF1Q9Y548 DDX3P2-201ENST00000446138 111 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 UQCRHP3-201ENST00000451503 251 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 AL109933.2-201ENST00000452651 260 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.98□□□□□ -1.93
YIPF1Q9Y548 RNU6-420P-201ENST00000458780 107 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 AL121769.1-201ENST00000469473 401 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.98□□□□□ -1.93
YIPF1Q9Y548 MTND4LP22-201ENST00000508209 276 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 AC104806.1-201ENST00000508720 308 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.98□□□□□ -1.93
YIPF1Q9Y548 RNA5SP291-201ENST00000517222 105 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 ATP5F1P5-201ENST00000526403 760 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 OR5AQ1P-201ENST00000527596 927 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.98□□□□□ -1.93
YIPF1Q9Y548 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.98□□□□□ -1.93
YIPF1Q9Y548 AC025678.1-201ENST00000567861 338 ntBASIC2.98□□□□□ -1.93
YIPF1Q9Y548 AL035413.2-201ENST00000604801 525 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms