Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MTND5P42-201ENST00000637720 498 ntBASIC2.53□□□□□ -2
ATG4BQ9Y4P1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.53□□□□□ -2
ATG4BQ9Y4P1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ATG4BQ9Y4P1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ATG4BQ9Y4P1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
ATG4BQ9Y4P1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.53□□□□□ -2
ATG4BQ9Y4P1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
ATG4BQ9Y4P1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AC062016.1-201ENST00000355719 319 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 RNU4-91P-201ENST00000364778 135 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 RNU6-1180P-201ENST00000364935 107 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 SNORD116-2-201ENST00000384274 95 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 SNORD116-6-201ENST00000384711 96 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 RNA5SP184-201ENST00000411071 108 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 HMGN2P35-201ENST00000412164 270 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AC092809.3-201ENST00000415453 231 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AL591212.2-201ENST00000433923 257 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 RPS24P1-201ENST00000438550 371 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 MTND1P27-201ENST00000451117 902 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AC008571.1-201ENST00000467232 300 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 TRBV1-201ENST00000476502 284 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AC117532.1-201ENST00000514638 323 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 Vault.3-201ENST00000516676 95 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 RNU6-677P-201ENST00000516914 101 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AC022616.3-201ENST00000523940 148 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AC007151.1-201ENST00000572774 483 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 MIR4635-201ENST00000583759 79 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AC040904.1-201ENST00000590850 223 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AC110760.3-201ENST00000598794 467 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 NRBF2P5-201ENST00000603087 788 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 BNIP3P9-201ENST00000603714 553 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AC006023.1-201ENST00000603944 259 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AP002360.4-201ENST00000606980 481 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AC135507.1-201ENST00000607214 561 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 TEX21P-201ENST00000447107 1476 ntBASIC2.52□□□□□ -2.01
ATG4BQ9Y4P1 AC010889.1-201ENST00000566193 2666 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 NACAP2-201ENST00000318548 624 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 SET-203ENST00000372688 801 ntTSL 2 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 RNU6-641P-201ENST00000384006 107 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 RNU6-190P-201ENST00000384154 102 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 NUP35P1-201ENST00000422734 947 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC063976.3-201ENST00000426849 329 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC092427.1-202ENST00000430569 476 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AL591704.1-201ENST00000432574 275 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC236972.1-201ENST00000433225 199 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 BRK1P2-201ENST00000442875 223 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC009296.1-201ENST00000443146 155 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 HMGN2P10-201ENST00000448085 265 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 GAPDHP17-201ENST00000449858 1001 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 SNORD109B-201ENST00000458961 67 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 SNORD109A-201ENST00000459128 67 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 SNORD42A-201ENST00000459584 64 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 RPL9P33-201ENST00000484311 566 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC139453.3-201ENST00000493276 369 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC105252.1-201ENST00000503089 286 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC098591.2-201ENST00000510152 315 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 RNU5F-8P-201ENST00000515941 111 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 RN7SKP40-201ENST00000517211 242 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AL356057.1-201ENST00000533798 831 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC103810.1-201ENST00000579873 453 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AL391813.1-201ENST00000603098 260 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 RPL12P50-201ENST00000603116 116 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AL158032.1-201ENST00000605401 106 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC022893.3-201ENST00000607665 437 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC011939.3-201ENST00000613686 466 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 PISRT1-201ENST00000626175 531 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 CU459211.1-201ENST00000635667 749 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AL512643.1-201ENST00000635735 524 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 MIR3199-2-201ENST00000636243 86 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 Z99571.1-201ENST00000636677 394 ntBASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.51□□□□□ -2.01
ATG4BQ9Y4P1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms