Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PKP3Q9Y446 AF117829.1-206ENST00000621883 3802 ntBASIC3.31□□□□□ -1.88
PKP3Q9Y446 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PKP3Q9Y446 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PKP3Q9Y446 AL049641.1-201ENST00000441055 1948 ntBASIC3.31□□□□□ -1.88
PKP3Q9Y446 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PKP3Q9Y446 RNU1-75P-201ENST00000347264 129 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 MIR23B-201ENST00000384832 97 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PKP3Q9Y446 SNORD70.1-201ENST00000391007 85 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 AL162578.1-201ENST00000406202 378 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 Y_RNA.615-201ENST00000410769 117 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 RNA5SP31-201ENST00000411144 127 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 AC063979.1-201ENST00000415539 377 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 RPS15AP6-201ENST00000420703 385 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 YME1L1P1-201ENST00000429435 297 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 AC097713.2-201ENST00000430199 356 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.3□□□□□ -1.88
PKP3Q9Y446 CST9LP2-201ENST00000437612 320 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 AC098614.3-201ENST00000438957 440 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.3□□□□□ -1.88
PKP3Q9Y446 PRSS3P4-201ENST00000453323 162 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.3□□□□□ -1.88
PKP3Q9Y446 HMGN1P18-201ENST00000457642 277 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 RPL21P13-201ENST00000488305 481 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.3□□□□□ -1.88
PKP3Q9Y446 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.3□□□□□ -1.88
PKP3Q9Y446 AC010486.1-201ENST00000511793 424 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 RNU6-1038P-201ENST00000516516 104 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.3□□□□□ -1.88
PKP3Q9Y446 MIR3186-201ENST00000577404 85 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 MIR548AC-201ENST00000585049 88 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 AC011712.1-201ENST00000588959 234 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.3□□□□□ -1.88
PKP3Q9Y446 AC073657.2-201ENST00000605661 303 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PKP3Q9Y446 AC084757.4-201ENST00000616350 526 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 AC090617.10-201ENST00000624308 134 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.3□□□□□ -1.88
PKP3Q9Y446 ZNF807-201ENST00000328088 1707 ntBASIC3.3□□□□□ -1.88
PKP3Q9Y446 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
PKP3Q9Y446 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PKP3Q9Y446 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
PKP3Q9Y446 CUL1P1-201ENST00000509510 2425 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PKP3Q9Y446 SNORA71.3-201ENST00000362582 128 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 RNA5SP72-201ENST00000364442 117 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 Y_RNA.279-201ENST00000364763 95 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 SNORA4.3-201ENST00000365564 137 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 RNU6-393P-201ENST00000384475 107 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PKP3Q9Y446 FAT1P1-201ENST00000406588 507 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.29□□□□□ -1.88
PKP3Q9Y446 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.29□□□□□ -1.88
PKP3Q9Y446 CECR9-201ENST00000453421 199 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 AL590639.1-201ENST00000456484 337 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 PMCHL2-203ENST00000457791 237 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 RNA5SP310-201ENST00000459084 116 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 RNU6-1208P-201ENST00000459588 107 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 RPL21P41-201ENST00000459863 264 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 AC007547.1-201ENST00000462177 490 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 Y_RNA.654-201ENST00000497848 106 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 AC110794.1-201ENST00000505816 425 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 AC104136.1-201ENST00000512969 394 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 Y_RNA.665-201ENST00000516177 98 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 RNU6-1282P-201ENST00000516735 96 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.29□□□□□ -1.88
PKP3Q9Y446 AC023050.3-201ENST00000541142 333 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 HIGD1AP1-201ENST00000550979 275 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.29□□□□□ -1.88
PKP3Q9Y446 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.29□□□□□ -1.88
PKP3Q9Y446 AL118558.2-201ENST00000556294 238 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 MIR5692A1-201ENST00000580523 69 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 AC092807.2-201ENST00000609367 243 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.29□□□□□ -1.88
PKP3Q9Y446 AC027309.3-201ENST00000623419 351 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 AP003400.5-201ENST00000624827 617 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.29□□□□□ -1.88
PKP3Q9Y446 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PKP3Q9Y446 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.29□□□□□ -1.88
PKP3Q9Y446 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PKP3Q9Y446 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PKP3Q9Y446 FAM35BP-202ENST00000497389 3337 ntBASIC3.29□□□□□ -1.88
PKP3Q9Y446 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
PKP3Q9Y446 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
PKP3Q9Y446 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PKP3Q9Y446 RNU6-82P-201ENST00000363970 107 ntBASIC3.28□□□□□ -1.88
PKP3Q9Y446 RNU6-522P-201ENST00000364497 107 ntBASIC3.28□□□□□ -1.88
PKP3Q9Y446 Y_RNA.378-201ENST00000365652 113 ntBASIC3.28□□□□□ -1.88
PKP3Q9Y446 RNU6-434P-201ENST00000384376 107 ntBASIC3.28□□□□□ -1.88
PKP3Q9Y446 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PKP3Q9Y446 AC012498.1-201ENST00000424037 437 ntBASIC3.28□□□□□ -1.88
PKP3Q9Y446 ZNF863P-201ENST00000426746 417 ntBASIC3.28□□□□□ -1.88
PKP3Q9Y446 AL669831.1-202ENST00000428504 417 ntBASIC3.28□□□□□ -1.88
PKP3Q9Y446 RPL23AP69-201ENST00000431134 458 ntBASIC3.28□□□□□ -1.88
PKP3Q9Y446 GTF2IP13-201ENST00000438487 386 ntBASIC3.28□□□□□ -1.88
PKP3Q9Y446 HMGB3P11-201ENST00000440127 604 ntBASIC3.28□□□□□ -1.88
PKP3Q9Y446 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.28□□□□□ -1.88
PKP3Q9Y446 SSXP4-201ENST00000451349 245 ntBASIC3.28□□□□□ -1.88
PKP3Q9Y446 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms