Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC002984.1-201ENST00000591692 448 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AL031274.2-201ENST00000599419 203 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AC009974.1-201ENST00000608881 455 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AC096772.1-201ENST00000609146 564 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AC012150.2-201ENST00000621300 544 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 MIR6852-201ENST00000621699 66 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 MIR6132-201ENST00000622083 109 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 IGHVIII-44-202ENST00000636235 289 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 AC013437.2-201ENST00000639587 677 ntBASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
RHBDD3Q9Y3P4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 RNU5E-1-201ENST00000362477 120 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 Y_RNA.192-201ENST00000363977 102 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 RNA5SP160-201ENST00000364866 120 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 MIR301A-201ENST00000385261 86 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 SNORA48.3-201ENST00000391081 134 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AC019070.1-201ENST00000415008 1024 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 OR51A5P-201ENST00000415429 942 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AL158823.1-201ENST00000418441 478 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 EEF1A1P39-201ENST00000440791 250 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AL021397.1-201ENST00000451806 248 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 snoU109.1-201ENST00000459339 135 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 RNU1-40P-201ENST00000516816 164 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 RNU1-97P-201ENST00000516872 164 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AC025755.1-201ENST00000521306 278 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AP006587.4-201ENST00000526053 529 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AC084851.1-201ENST00000529105 249 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AC068587.4-201ENST00000533893 186 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AC112220.3-201ENST00000605502 502 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AC099654.9-201ENST00000637055 678 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AC106858.1-201ENST00000637497 429 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AC099654.8-201ENST00000637757 681 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 ZNF702P-202ENST00000434269 1966 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 AC092125.1-201ENST00000562568 1995 ntBASIC1.85□□□□□ -2.11
RHBDD3Q9Y3P4 MIR449A-201ENST00000362113 91 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 SNORA25B-201ENST00000365507 128 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 SRIP2-201ENST00000428470 166 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 TXNL1P1-201ENST00000429528 554 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 KATNBL1P6-201ENST00000453433 915 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 BTF3P15-201ENST00000455606 336 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AC112771.1-201ENST00000463581 102 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AC096571.1-202ENST00000506634 735 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 SCARNA16.3-201ENST00000516595 184 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AC091163.3-201ENST00000518269 1144 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AC034114.1-201ENST00000520293 285 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AC107953.1-201ENST00000522216 297 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 OR5AQ1P-201ENST00000527596 927 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 SNRPGP18-201ENST00000553000 214 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 MIR4448-201ENST00000584360 86 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 BNIP3P27-201ENST00000599991 412 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AL670379.6-201ENST00000603753 252 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AL670379.11-201ENST00000604059 253 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AL670379.10-201ENST00000604330 253 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 APOOP1-201ENST00000604695 592 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AC008162.1-201ENST00000604718 254 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AL670379.1-201ENST00000604752 252 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AL670379.5-201ENST00000605253 252 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AL670379.12-201ENST00000605291 253 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AL670379.8-201ENST00000605353 252 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AL670379.9-201ENST00000605428 253 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AL121917.1-203ENST00000605534 577 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AL670379.7-201ENST00000605823 252 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 AC072039.2-201ENST00000608883 439 ntBASIC1.84□□□□□ -2.11
RHBDD3Q9Y3P4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
RHBDD3Q9Y3P4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.84□□□□□ -2.12
RHBDD3Q9Y3P4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
RHBDD3Q9Y3P4 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 RNU5E-10P-201ENST00000363506 118 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 RNA5SP138-201ENST00000365098 114 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 Z98749.2-208ENST00000381646 500 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 SNORA11.4-201ENST00000408823 129 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 RNU2-40P-201ENST00000410833 196 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 XKRYP1-201ENST00000423438 492 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 XKRYP2-201ENST00000432915 492 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 NEFMP1-201ENST00000443423 1006 ntBASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.83□□□□□ -2.12
RHBDD3Q9Y3P4 AC003071.1-201ENST00000451219 789 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms