Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
UBE2D4Q9Y2X8 AL118508.4-201ENST00000624142 1176 ntBASIC0.52□□□□□ -2.33
UBE2D4Q9Y2X8 AL359740.1-201ENST00000624340 592 ntBASIC0.52□□□□□ -2.33
UBE2D4Q9Y2X8 AC090517.3-201ENST00000625170 141 ntBASIC0.52□□□□□ -2.33
UBE2D4Q9Y2X8 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.52□□□□□ -2.33
UBE2D4Q9Y2X8 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.52□□□□□ -2.33
UBE2D4Q9Y2X8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.52□□□□□ -2.33
UBE2D4Q9Y2X8 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.52□□□□□ -2.33
UBE2D4Q9Y2X8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
UBE2D4Q9Y2X8 RNA5SP327-201ENST00000362494 101 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 RNU6-486P-201ENST00000363116 107 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 RNU6-271P-201ENST00000363858 105 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 RNU6-26P-201ENST00000383985 107 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 RNU6-17P-201ENST00000384245 107 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 RNU6-18P-201ENST00000384527 107 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 MIR100-201ENST00000385259 80 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 RNU11-5P-201ENST00000391216 129 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 AC006461.1-201ENST00000412637 326 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 AL160275.3-201ENST00000423876 471 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 CST2P1-201ENST00000425770 87 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 TRIM60P13-201ENST00000432350 1283 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 UBE2V2P3-201ENST00000433562 437 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 MTND5P15-201ENST00000434246 349 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 FABP5P14-201ENST00000437273 393 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 RBBP8P1-201ENST00000449447 1844 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 AP1S2P1-201ENST00000457344 379 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 snoU109.4-201ENST00000458953 143 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 MTCYBP16-201ENST00000509187 1129 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 EEF1B2P4-201ENST00000551398 348 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 AL359212.1-201ENST00000556608 614 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 MIR4452-201ENST00000583004 71 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 MIR4653-201ENST00000585107 83 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 AC010900.2-201ENST00000604508 210 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 AC010738.1-201ENST00000604970 987 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 AP000238.1-201ENST00000608759 426 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 MIR6504-201ENST00000613520 61 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 MIR5739-201ENST00000619803 80 ntBASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
UBE2D4Q9Y2X8 MTND5P35-201ENST00000557537 1720 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 HSBP1P2-201ENST00000299671 229 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 RNU6-251P-201ENST00000363235 104 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 MIR1283-2-201ENST00000408621 87 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AL078601.1-201ENST00000444542 271 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 RPS15AP17-201ENST00000470598 390 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AL121594.1-201ENST00000475906 575 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 ATP5EP1-201ENST00000510257 156 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 RNA5SP220-201ENST00000516298 104 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 RN7SKP265-201ENST00000516448 223 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 CENPUP1-201ENST00000526649 1202 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AC015688.2-201ENST00000584523 262 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 FAM106DP-201ENST00000586416 501 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AL391813.1-201ENST00000603098 260 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AL020996.3-201ENST00000606617 222 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AC080013.4-201ENST00000607624 649 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AC108706.1-201ENST00000611053 297 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 AC006213.4-201ENST00000616184 634 ntBASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.5□□□□□ -2.33
UBE2D4Q9Y2X8 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 OR5T3-201ENST00000303059 1023 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 SNORA25B-201ENST00000365507 128 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 RNA5SP247-201ENST00000411181 105 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 CYCSP33-201ENST00000414485 327 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 UBE2V1P9-201ENST00000414760 368 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 PIGFP2-201ENST00000421400 651 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 AC013410.2-201ENST00000422627 201 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 NDUFB4P7-201ENST00000423198 363 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 AL035410.1-201ENST00000427409 427 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 AC104073.1-201ENST00000451988 151 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 SNRPFP3-201ENST00000457792 225 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 AC018437.1-201ENST00000492214 406 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 RNU6-488P-201ENST00000515918 99 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 RNU5A-7P-201ENST00000515979 116 ntBASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.49□□□□□ -2.33
UBE2D4Q9Y2X8 AC011604.1-201ENST00000545978 196 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms