Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 API5P2-201ENST00000397055 1498 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 RNU6-1252P-201ENST00000363054 104 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 RNU6-343P-201ENST00000364709 104 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 Y_RNA.274-201ENST00000364714 101 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 RNU4-7P-201ENST00000364758 141 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 MIR1302-6-201ENST00000408466 90 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 UBE2FP1-201ENST00000416536 447 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 RPL7P52-201ENST00000449200 742 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 PABPC1P3-201ENST00000469174 459 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 RPL7P5-201ENST00000471472 736 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 TMEM251P1-201ENST00000503717 318 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 MTND1P19-201ENST00000511780 315 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 RNU6-1038P-201ENST00000516516 104 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 AC128657.1-201ENST00000549459 145 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 SETP2-201ENST00000553886 926 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 LARP7P2-201ENST00000575306 125 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 AC023813.4-201ENST00000607580 580 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 MIR8062-201ENST00000621515 85 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 BMS1P21-201ENST00000634565 365 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 AL512643.1-201ENST00000635735 524 ntBASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
NOTCH3Q9UM47 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 RNU6-774P-201ENST00000363238 107 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 RNU6-115P-201ENST00000364310 107 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 RNU6-200P-201ENST00000364743 107 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 SNORA20.1-201ENST00000364790 130 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 SNORA75B-201ENST00000384053 137 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 Y_RNA.424-201ENST00000384063 103 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AL034374.1-201ENST00000406329 351 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 RAC1P6-201ENST00000423911 575 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 PSMA6P3-201ENST00000428242 164 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 RPS24P8-201ENST00000431490 402 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 MTATP6P16-201ENST00000434543 526 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AL118520.1-201ENST00000450770 291 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 GSTA11P-201ENST00000452866 669 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AP000942.1-201ENST00000463969 747 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC104563.1-201ENST00000476147 376 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 KC877373.1-201ENST00000479066 408 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 RPL23AP41-201ENST00000484754 458 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC055855.1-201ENST00000489563 579 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 RNU6-570P-201ENST00000517051 105 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC009779.6-201ENST00000603972 165 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 PISRT1.1-201ENST00000616930 107 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC007998.5-201ENST00000622938 237 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 ZNF826P-207ENST00000622273 1910 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 Y_RNA.22-201ENST00000362492 102 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 Y_RNA.60-201ENST00000362831 98 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 SNORA62.1-201ENST00000364287 154 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 Y_RNA.462-201ENST00000384268 102 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 Y_RNA.482-201ENST00000384377 111 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 DSTNP4-201ENST00000399472 474 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 RNU2-6P-201ENST00000411404 190 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AL121890.1-201ENST00000435457 205 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC105402.2-201ENST00000438503 358 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC099799.1-201ENST00000439809 192 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC073910.1-201ENST00000445047 438 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 TRBV12-2-201ENST00000489763 344 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 Y_RNA.670-201ENST00000516255 105 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC008489.1-201ENST00000524271 483 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC022882.1-201ENST00000532142 501 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC135001.1-201ENST00000544546 283 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC011155.2-201ENST00000623202 216 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 AC018555.1-201ENST00000567548 1980 ntBASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC2.64□□□□□ -1.99
NOTCH3Q9UM47 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms