Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 AC091042.1-201ENST00000579213 173 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 AL031595.2-201ENST00000624215 19071 ntBASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
FOXD3Q9UJU5 AC090740.1-201ENST00000623193 2262 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 RNU6-879P-201ENST00000364328 108 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 SNORD116-20-201ENST00000384529 92 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 RNA5SP213-201ENST00000391031 106 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 SNORA53-201ENST00000391141 249 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 RPS4XP3-201ENST00000398541 413 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 UBA52P6-201ENST00000399822 382 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 MTHFD2P2-201ENST00000407725 247 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 HSPE1P25-201ENST00000455484 251 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 RNA5SP103-201ENST00000459503 118 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 AP000870.1-201ENST00000472927 406 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 RN7SL481P-201ENST00000477764 299 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 SCARNA24.2-201ENST00000516968 130 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 AL391358.1-201ENST00000605342 190 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 SNORD113-5-201ENST00000607261 78 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 AC011476.5-201ENST00000615594 130 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 LINC00901.1-201ENST00000617252 152 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXD3Q9UJU5 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 Y_RNA.83-201ENST00000363005 113 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 RNU1-100P-201ENST00000365255 165 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 UBBP2-201ENST00000376781 231 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 SNORA29-201ENST00000384183 140 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 RNU6-318P-201ENST00000384283 103 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 RPS16P5-201ENST00000406501 404 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 RNU2-20P-201ENST00000410425 191 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 AC016397.1-201ENST00000412463 242 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 AC104333.2-201ENST00000422630 192 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 RPL35AP21-201ENST00000437667 333 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 AC096638.1-201ENST00000444678 216 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 AL392103.1-201ENST00000447000 198 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 AC125238.1-201ENST00000448842 249 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 AL691482.1-201ENST00000453255 87 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 SEPT14P8-201ENST00000508026 178 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 ENPP7P9-201ENST00000514456 627 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 RPL23AP53-201ENST00000521854 457 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 BNIP3P1-201ENST00000547295 580 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 AL590392.1-201ENST00000604960 446 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 AC019159.1-201ENST00000605094 187 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 MIR6780A-201ENST00000615089 68 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 MIR7641-1-201ENST00000627518 61 ntBASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
FOXD3Q9UJU5 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 RNU5B-2P-201ENST00000363036 113 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 RNA5SP515-201ENST00000364570 118 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 RNU6-886P-201ENST00000384319 105 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 RNU6-102P-201ENST00000384485 104 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 RNU6-541P-201ENST00000384709 110 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 MIR298-201ENST00000401212 88 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 RNA5SP113-201ENST00000410486 84 ntBASIC4.42□□□□□ -1.7
FOXD3Q9UJU5 RNU5A-5P-201ENST00000411054 116 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms