Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC005498.1-201ENST00000592125 465 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 BNIP3P30-201ENST00000601184 574 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AP002360.4-201ENST00000606980 481 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC097468.3-201ENST00000607956 456 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC108747.1-201ENST00000609508 535 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC009878.1-201ENST00000621819 340 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AL356596.1-201ENST00000624230 379 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 AC064859.1-201ENST00000624741 174 ntBASIC2.84□□□□□ -1.95
CLIP2Q9UDT6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CLIP2Q9UDT6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 CR848007.1-201ENST00000442354 1699 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 RPL21P132-201ENST00000331267 462 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 RNU6-1283P-201ENST00000365314 105 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 RNU6-1215P-201ENST00000384441 102 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AL162578.1-201ENST00000406202 378 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 RNU4-53P-201ENST00000410828 140 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 UBE2FP1-201ENST00000416536 447 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 MTND1P23-201ENST00000416931 372 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AC104651.1-201ENST00000427559 735 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 FAM103A2P-201ENST00000444122 354 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 USP9YP29-201ENST00000445112 563 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 ZNF114P1-201ENST00000453500 292 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 RPL30P6-201ENST00000475925 342 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 RPL31P41-201ENST00000477967 372 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 RPS15AP36-201ENST00000492022 382 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AC026436.1-201ENST00000510537 270 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AC008549.1-201ENST00000512900 643 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 OR4R1P-201ENST00000529879 463 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 OR5BN1P-201ENST00000532955 829 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AC007938.3-201ENST00000604965 623 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AL031775.1-201ENST00000607014 887 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AL160394.1-201ENST00000624765 724 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AC006927.3-201ENST00000638789 384 ntBASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.83□□□□□ -1.96
CLIP2Q9UDT6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AC006020.1-201ENST00000420179 1854 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 RNA5SP88-201ENST00000365560 109 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AC009414.1-201ENST00000427200 443 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 LARP1BP3-201ENST00000437229 869 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 DDX3P2-201ENST00000446138 111 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 HIGD1AP2-201ENST00000446367 280 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 EPS15P1-201ENST00000448836 336 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AC093899.1-201ENST00000457984 376 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AC104685.1-201ENST00000502445 371 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 RNA5SP24-201ENST00000516478 95 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 SUB1P1-201ENST00000524415 382 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AL133153.1-201ENST00000557756 303 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AC002400.1-201ENST00000569310 726 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 ISCA1P3-201ENST00000577104 373 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AF038458.1-201ENST00000588406 262 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AP003465.2-201ENST00000602571 373 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 BCRP9-201ENST00000605312 388 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AC004908.2-201ENST00000609090 574 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AC010678.1-201ENST00000614118 713 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AC015540.1-201ENST00000615828 501 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 AC099654.13-201ENST00000639774 207 ntBASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.82□□□□□ -1.96
CLIP2Q9UDT6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 SET-203ENST00000372688 801 ntTSL 2 BASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 RNU6-1119P-201ENST00000384349 108 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 RNU6-769P-201ENST00000384407 104 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 MIR19A-201ENST00000384878 82 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 CCNG1P1-201ENST00000406783 885 ntBASIC2.81□□□□□ -1.96
CLIP2Q9UDT6 SNORA3.2-201ENST00000408221 125 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms