Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
VAPAQ9P0L0 RNU6-1159P-201ENST00000362933 107 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 RNU1-72P-201ENST00000362976 153 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 RNU6-1280P-201ENST00000365211 107 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 AL133475.1-201ENST00000404414 305 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 MIR1302-8-201ENST00000408342 128 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 RN7SKP223-201ENST00000410582 62 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 OR51A5P-201ENST00000415429 942 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.74□□□□□ -2.13
VAPAQ9P0L0 AIMP1P2-201ENST00000425294 312 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.74□□□□□ -2.13
VAPAQ9P0L0 RPS15AP9-201ENST00000439856 381 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.74□□□□□ -2.13
VAPAQ9P0L0 AC007327.1-201ENST00000447461 264 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.74□□□□□ -2.13
VAPAQ9P0L0 CYP2C59P-201ENST00000457790 269 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.74□□□□□ -2.13
VAPAQ9P0L0 RPF2P2-201ENST00000504693 896 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 AC079395.1-201ENST00000510981 262 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.74□□□□□ -2.13
VAPAQ9P0L0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.74□□□□□ -2.13
VAPAQ9P0L0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.74□□□□□ -2.13
VAPAQ9P0L0 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VAPAQ9P0L0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.74□□□□□ -2.13
VAPAQ9P0L0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VAPAQ9P0L0 AL606834.3-201ENST00000602615 496 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 PART1_2.1-201ENST00000612397 250 ntBASIC1.74□□□□□ -2.13
VAPAQ9P0L0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 SNORD48-201ENST00000364953 64 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AC119751.3-201ENST00000399720 670 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AL512604.1-201ENST00000404812 257 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 RPL31P63-201ENST00000422565 375 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AC096920.1-201ENST00000423991 241 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AL353706.1-201ENST00000436728 494 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AL161788.1-201ENST00000441805 169 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 USP9YP10-201ENST00000454868 628 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 MTCO1P42-201ENST00000457379 726 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 RPL23AP41-201ENST00000484754 458 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AC021146.8-201ENST00000507455 733 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AC116655.1-201ENST00000508324 901 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 SNORA31.3-201ENST00000516029 96 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 ACA59.2-201ENST00000517061 156 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AC233702.2-202ENST00000562547 291 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AL031274.2-201ENST00000599419 203 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AC034229.4-201ENST00000607861 441 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AC109809.1-201ENST00000619665 545 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 IGHVIII-44-202ENST00000636235 289 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 AC099654.9-201ENST00000637055 678 ntBASIC1.73□□□□□ -2.13
VAPAQ9P0L0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VAPAQ9P0L0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
VAPAQ9P0L0 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VAPAQ9P0L0 U3.13-201ENST00000364804 214 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 U8.14-201ENST00000390843 143 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 NDUFS5P1-201ENST00000405668 289 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 SNORA3.2-201ENST00000408221 125 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 RNA5SP425-201ENST00000410336 112 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 AC019070.1-201ENST00000415008 1024 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 AC083875.1-201ENST00000419509 405 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VAPAQ9P0L0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.72□□□□□ -2.13
VAPAQ9P0L0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.72□□□□□ -2.13
VAPAQ9P0L0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.72□□□□□ -2.13
VAPAQ9P0L0 AL136380.1-201ENST00000447970 162 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 FABP5P13-201ENST00000452144 328 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.72□□□□□ -2.13
VAPAQ9P0L0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VAPAQ9P0L0 RPL23AP42-201ENST00000471152 471 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 AC018437.1-201ENST00000492214 406 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VAPAQ9P0L0 AC009712.1-201ENST00000564938 316 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 MIR4293-201ENST00000584305 78 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.72□□□□□ -2.13
VAPAQ9P0L0 AC009974.1-201ENST00000608881 455 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.72□□□□□ -2.13
VAPAQ9P0L0 AL121895.2-201ENST00000619558 447 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 AC012150.2-201ENST00000621300 544 ntBASIC1.72□□□□□ -2.13
VAPAQ9P0L0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 AC092125.1-201ENST00000562568 1995 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 RNU6-188P-201ENST00000364207 107 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 Z98749.2-208ENST00000381646 500 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 HMGN2P39-201ENST00000398005 273 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.71□□□□□ -2.14
VAPAQ9P0L0 DPH3P2-201ENST00000422618 250 ntBASIC1.71□□□□□ -2.14
VAPAQ9P0L0 XKRYP1-201ENST00000423438 492 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms