Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PTENP1-201ENST00000447117 1215 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 MTATP6P14-201ENST00000455189 673 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.9□□□□□ -2.11
TREX1Q9NSU2 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.9□□□□□ -2.11
TREX1Q9NSU2 RN7SKP258-201ENST00000517151 304 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.9□□□□□ -2.11
TREX1Q9NSU2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.9□□□□□ -2.11
TREX1Q9NSU2 OR11H5P-201ENST00000554039 926 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.9□□□□□ -2.11
TREX1Q9NSU2 MIR4648-201ENST00000580107 72 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AC068790.3-201ENST00000602988 553 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AC008121.1-201ENST00000603244 268 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 RPP40P2-201ENST00000603596 712 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AC080013.3-201ENST00000606839 578 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AC097468.3-201ENST00000607956 456 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AL157392.4-201ENST00000609756 345 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AC098657.3-201ENST00000620434 263 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AC244517.12-201ENST00000623581 663 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AL136313.1-201ENST00000624804 202 ntBASIC1.9□□□□□ -2.11
TREX1Q9NSU2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.9□□□□□ -2.11
TREX1Q9NSU2 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 MIR147B-201ENST00000390185 80 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AL139397.2-201ENST00000404529 772 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AL359634.1-202ENST00000404721 284 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 RN7SKP266-201ENST00000410232 287 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 RNU2-20P-201ENST00000410425 191 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 EIF1AXP1-201ENST00000419267 435 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 SRIP2-201ENST00000428470 166 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 HMGB1P27-201ENST00000431429 603 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 FABP5P14-201ENST00000437273 393 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 RSU1P2-202ENST00000437884 485 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AL161651.1-201ENST00000440882 223 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 MTND3P1-201ENST00000441336 220 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 RPL38P4-201ENST00000502376 214 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 MRPS17P9-201ENST00000511924 393 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 RNU6-64P-201ENST00000517119 105 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 SNORA31.25-201ENST00000517242 134 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AP000907.2-201ENST00000530827 353 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AC006199.1-201ENST00000548728 219 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 MRPS36P5-201ENST00000551909 298 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AL121821.2-201ENST00000556081 394 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AC091057.3-201ENST00000602684 733 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AL096840.1-201ENST00000603287 93 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AL158042.1-201ENST00000605338 460 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AC011939.3-201ENST00000613686 466 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.89□□□□□ -2.11
TREX1Q9NSU2 AP000776.1-201ENST00000530032 1663 ntBASIC1.89□□□□□ -2.11
TREX1Q9NSU2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 RNU1-148P-201ENST00000384472 162 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AL021407.1-201ENST00000404531 386 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 BX276092.3-201ENST00000424182 230 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC005094.1-201ENST00000440420 368 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 HMGN2P10-201ENST00000448085 265 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AL031313.1-201ENST00000448435 256 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 RPL23AP35-201ENST00000451906 501 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC007182.2-201ENST00000489251 402 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC139453.3-201ENST00000493276 369 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC008526.1-201ENST00000509149 338 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 MIR4509-3-201ENST00000578671 94 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC105245.1-201ENST00000581934 244 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 MIR4509-2-201ENST00000583920 94 ntBASIC1.88□□□□□ -2.11
TREX1Q9NSU2 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.88□□□□□ -2.11
TREX1Q9NSU2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms