Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RNU6-1140P-201ENST00000410517 106 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 RNU2-32P-201ENST00000411193 191 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AL592148.1-201ENST00000413568 445 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AC006946.1-201ENST00000429106 328 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AL121601.2-201ENST00000438019 707 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 HMGB1P18-201ENST00000438801 619 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AC007677.1-201ENST00000445757 515 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 MTCO1P27-201ENST00000448269 226 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 RPL37P6-201ENST00000460682 294 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AL049873.1-201ENST00000480540 376 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AC007182.2-201ENST00000489251 402 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 RPL39P36-201ENST00000490784 156 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AC234781.5-201ENST00000508429 271 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 RN7SKP179-201ENST00000516126 217 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 RNU2-53P-201ENST00000516257 147 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-1028P-201ENST00000517164 93 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AC109329.1-201ENST00000518744 317 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 UBTFL10-201ENST00000528532 562 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AP003034.1-201ENST00000534621 422 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 RPS3AP4-201ENST00000555161 764 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AC104581.2-201ENST00000572227 430 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 WISP1-OT1-201ENST00000602893 642 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 Z82243.1-201ENST00000609432 473 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AC090970.3-201ENST00000612566 866 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 AL136313.1-201ENST00000624804 202 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 PCMTD1P7-201ENST00000634506 357 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 FARSBP1-201ENST00000435808 1778 ntBASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.83□□□□□ -2.28
CDC42SE1Q9NRR8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 Y_RNA.67-201ENST00000362870 100 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 Y_RNA.534-201ENST00000384599 112 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AL138885.1-201ENST00000405921 675 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 RNU2-36P-201ENST00000410361 191 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 MTCO2P20-201ENST00000437339 673 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AP000949.1-201ENST00000438328 629 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 SNRPEP7-201ENST00000438350 220 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 ZNF886P-201ENST00000450781 723 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 BTF3P15-201ENST00000455606 336 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 NDUFA5P9-201ENST00000472609 340 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC099513.1-201ENST00000490423 301 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC008837.2-201ENST00000513076 418 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 MTCO1P35-201ENST00000515270 228 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 RNVU1-2-201ENST00000516326 135 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 SNORA31.19-201ENST00000517079 126 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AP005660.1-201ENST00000522972 293 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AP003049.1-201ENST00000529418 457 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC018630.3-201ENST00000542637 96 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC007458.1-201ENST00000542812 373 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 MIR4284-201ENST00000578924 81 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC073410.2-201ENST00000603240 332 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 MTATP6P2-201ENST00000603319 678 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC007621.1-201ENST00000604544 437 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC116312.1-201ENST00000606841 314 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC096772.1-201ENST00000609146 564 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC012360.2-201ENST00000609349 391 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 MIR7155-201ENST00000615925 56 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 MIR1910-201ENST00000636955 80 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 RBBP8P1-201ENST00000449447 1844 ntBASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CDC42SE1Q9NRR8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.81□□□□□ -2.28
CDC42SE1Q9NRR8 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms