Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 RPS20P2-201ENST00000402520 389 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 NDUFS5P1-201ENST00000405668 289 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 RPS24P7-201ENST00000416921 246 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AC093106.2-201ENST00000428212 385 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 GPM6BP2-201ENST00000432046 144 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AL606662.1-201ENST00000445763 553 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 HIGD1AP2-201ENST00000446367 280 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 GPM6BP1-201ENST00000446387 144 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AC013267.1-201ENST00000458227 267 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 RPL23AP49-201ENST00000492925 468 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AC008413.1-201ENST00000511864 177 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 SCARNA3-201ENST00000517097 143 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AP006587.4-201ENST00000526053 529 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AC005261.5-201ENST00000596280 355 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AL391813.1-201ENST00000603098 260 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AP001981.2-201ENST00000603241 418 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AC243829.7-201ENST00000633081 225 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 AC007671.2-201ENST00000637344 619 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 MTND5P29-201ENST00000458676 1807 ntBASIC1.87□□□□□ -2.11
EXOSC4Q9NPD3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 RNU6-288P-201ENST00000363690 104 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 RNY3P13-201ENST00000365542 102 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AL355497.1-201ENST00000406262 551 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 RNU2-40P-201ENST00000410833 196 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 RNU2-68P-201ENST00000410878 191 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 RPL22P18-201ENST00000417197 377 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 RPL30P4-201ENST00000429309 333 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 RPL36AP53-201ENST00000432891 316 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AC098831.1-201ENST00000440661 216 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 SNORD11.1-201ENST00000459482 85 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 TRBV1-201ENST00000476502 284 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 ELOCP32-201ENST00000548625 324 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AP000811.1-201ENST00000603803 651 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AP000860.1-201ENST00000605250 559 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AC090970.3-201ENST00000612566 866 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AC010678.1-201ENST00000614118 713 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 DUXAP9-208ENST00000622815 614 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AC068787.1-201ENST00000623908 691 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 AC007490.1-201ENST00000624321 703 ntBASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
EXOSC4Q9NPD3 HSPA8P4-201ENST00000511877 1920 ntBASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 AL359851.1-201ENST00000569460 4997 ntBASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 RNU4-28P-201ENST00000364739 141 ntBASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 RNU6-809P-201ENST00000384461 107 ntBASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 RNU1-148P-201ENST00000384472 162 ntBASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 AL356379.1-201ENST00000414105 126 ntBASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 AC098592.1-201ENST00000419352 333 ntBASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 AC003685.2-201ENST00000422795 395 ntBASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 AC011233.1-201ENST00000422812 283 ntBASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 AC104651.1-201ENST00000427559 735 ntBASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 USP9YP8-201ENST00000441913 500 ntBASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 AL118520.1-201ENST00000450770 291 ntBASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 FABP5P15-201ENST00000453566 214 ntBASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 AC108059.3-201ENST00000456388 214 ntBASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.85□□□□□ -2.11
EXOSC4Q9NPD3 RPS27P21-201ENST00000486977 252 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms