Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SNORD81.1-201ENST00000363064 77 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 Y_RNA.143-201ENST00000363520 106 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 RNA5SP435-201ENST00000364044 108 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 RNA5SP235-201ENST00000365411 114 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 RN7SKP269-201ENST00000365545 319 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 RNU6-166P-201ENST00000384371 107 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 RNY3P4-201ENST00000384428 101 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SSU72Q9NP77 SNORD66.1-201ENST00000391230 76 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 MTCYBP2-201ENST00000407745 171 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 AC093162.1-201ENST00000419682 124 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 AC244098.2-201ENST00000422068 99 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 TMEM167AP1-201ENST00000423409 219 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.37□□□□□ -1.71
SSU72Q9NP77 AC091286.1-201ENST00000431233 461 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 BX679664.1-201ENST00000434429 253 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.37□□□□□ -1.71
SSU72Q9NP77 AL513124.1-201ENST00000450410 614 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 AL136097.1-201ENST00000456945 913 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 AC034236.1-201ENST00000469891 373 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 HMGB1P22-201ENST00000505315 124 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 AC025554.1-201ENST00000505641 188 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 AK3P2-201ENST00000507976 429 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 AC026784.1-201ENST00000507986 352 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.37□□□□□ -1.71
SSU72Q9NP77 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 SNORA31.20-201ENST00000517111 133 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.37□□□□□ -1.71
SSU72Q9NP77 AC004024.1-201ENST00000549244 247 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 MIR4458-201ENST00000578872 75 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 AC090132.2-201ENST00000615881 347 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.37□□□□□ -1.71
SSU72Q9NP77 AP002799.1-201ENST00000623552 423 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSU72Q9NP77 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SSU72Q9NP77 AC006971.1-201ENST00000407916 4486 ntBASIC4.37□□□□□ -1.71
SSU72Q9NP77 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSU72Q9NP77 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.37□□□□□ -1.71
SSU72Q9NP77 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSU72Q9NP77 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SSU72Q9NP77 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SSU72Q9NP77 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSU72Q9NP77 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSU72Q9NP77 AP001148.1-201ENST00000624124 2359 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 AC018555.1-201ENST00000567548 1980 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SSU72Q9NP77 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSU72Q9NP77 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSU72Q9NP77 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.36□□□□□ -1.71
SSU72Q9NP77 Y_RNA.54-201ENST00000362766 105 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 U3.13-201ENST00000364804 214 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 RNU6-746P-201ENST00000384112 109 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 Y_RNA.439-201ENST00000384119 94 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 Y_RNA.581-201ENST00000391017 97 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 AL391361.1-201ENST00000405580 489 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 RNU2-20P-201ENST00000410425 191 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 TOMM22P1-201ENST00000418578 312 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 AL358472.1-201ENST00000431295 329 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 AC104332.1-201ENST00000440471 797 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 RPL23AP93-201ENST00000440847 484 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSU72Q9NP77 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSU72Q9NP77 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.36□□□□□ -1.71
SSU72Q9NP77 RPS20P22-201ENST00000473700 357 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 AC104164.2-201ENST00000496953 495 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 RN7SKP276-201ENST00000516242 268 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 AC109479.2-201ENST00000517842 174 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 MIR3691-201ENST00000578066 90 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.36□□□□□ -1.71
SSU72Q9NP77 BX284668.6-201ENST00000606899 438 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 MIR7702-201ENST00000621931 59 ntBASIC4.36□□□□□ -1.71
SSU72Q9NP77 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SSU72Q9NP77 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSU72Q9NP77 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.36□□□□□ -1.71
SSU72Q9NP77 AC016588.2-201ENST00000632484 3021 ntBASIC4.35□□□□□ -1.71
SSU72Q9NP77 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SSU72Q9NP77 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSU72Q9NP77 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SSU72Q9NP77 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.35□□□□□ -1.71
SSU72Q9NP77 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSU72Q9NP77 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SSU72Q9NP77 RNU6-1266P-201ENST00000362794 105 ntBASIC4.35□□□□□ -1.71
SSU72Q9NP77 Y_RNA.270-201ENST00000364693 104 ntBASIC4.35□□□□□ -1.71
SSU72Q9NP77 MIR765-201ENST00000390226 114 ntBASIC4.35□□□□□ -1.71
SSU72Q9NP77 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SSU72Q9NP77 AL079342.1-201ENST00000401460 267 ntBASIC4.35□□□□□ -1.71
SSU72Q9NP77 RPS20P14-201ENST00000412545 360 ntBASIC4.35□□□□□ -1.71
SSU72Q9NP77 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.35□□□□□ -1.71
SSU72Q9NP77 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.35□□□□□ -1.71
SSU72Q9NP77 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.35□□□□□ -1.71
SSU72Q9NP77 RNU6-1256P-201ENST00000516539 103 ntBASIC4.35□□□□□ -1.71
SSU72Q9NP77 RNU6-255P-201ENST00000516957 105 ntBASIC4.35□□□□□ -1.71
SSU72Q9NP77 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.35□□□□□ -1.71
SSU72Q9NP77 AC093023.1-201ENST00000547375 507 ntBASIC4.35□□□□□ -1.71
SSU72Q9NP77 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.35□□□□□ -1.71
SSU72Q9NP77 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.35□□□□□ -1.71
SSU72Q9NP77 AC022467.1-201ENST00000614738 749 ntBASIC4.35□□□□□ -1.71
SSU72Q9NP77 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.35□□□□□ -1.71
SSU72Q9NP77 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.35□□□□□ -1.71
SSU72Q9NP77 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms