Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 CPDP1-201ENST00000579660 283 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 MIR3138-201ENST00000585238 82 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AL159153.1-201ENST00000619688 317 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AC130454.1-201ENST00000622948 401 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 U6.104-201ENST00000637979 90 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 AL356489.2-201ENST00000566968 3528 ntBASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SEC61A2Q9H9S3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 ASNSP1-201ENST00000518311 1939 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-37P-201ENST00000362692 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-11P-201ENST00000364234 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU4-50P-201ENST00000364361 141 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-7-201ENST00000364784 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-8-201ENST00000365467 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 SNORA62-201ENST00000365493 153 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-25P-201ENST00000383873 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-1-201ENST00000383898 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-48P-201ENST00000384161 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-36P-201ENST00000384172 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-4P-201ENST00000384205 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-708P-201ENST00000384217 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-5P-201ENST00000384238 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 Y_RNA.471-201ENST00000384312 102 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-3P-201ENST00000384314 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-16P-201ENST00000384385 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-15P-201ENST00000384534 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-2-201ENST00000384627 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-29P-201ENST00000384637 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-9-201ENST00000384776 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-33P-201ENST00000384793 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 EI24P1-201ENST00000416584 867 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 MTATP6P4-201ENST00000427725 675 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RPL7P5-201ENST00000471472 736 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RPS29P19-201ENST00000479709 171 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 PARP4P3-201ENST00000510265 317 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 MIR892C-201ENST00000516410 77 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AP003733.2-201ENST00000529409 171 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AC006064.5-201ENST00000541782 248 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AL121603.1-201ENST00000553815 142 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 HMGB1P14-201ENST00000557424 591 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RPS29P30-201ENST00000600975 111 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AL390123.1-201ENST00000603216 237 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AC073410.2-201ENST00000603240 332 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 RNU6-6P-201ENST00000606623 107 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AC006023.2-201ENST00000609916 167 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AC034102.8-201ENST00000615146 484 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 SDR42E1P4-201ENST00000620894 481 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 NCAPGP1-201ENST00000505112 1814 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AP001486.2-201ENST00000561652 5113 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 AC018555.1-201ENST00000567548 1980 ntBASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SEC61A2Q9H9S3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 RPL9P7-201ENST00000330965 580 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 Y_RNA.105-201ENST00000363182 111 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 RNU1-132P-201ENST00000364300 164 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 U8.8-201ENST00000365399 135 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 MIR628-201ENST00000385229 95 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 RNU6-1093P-201ENST00000391194 107 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 RNA5SP36-201ENST00000410197 133 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AC092573.2-201ENST00000434546 243 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AL513043.1-201ENST00000439124 535 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 RPL23AP81-201ENST00000455252 467 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 LINC01399-202ENST00000458450 244 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 RPS23P7-201ENST00000466210 444 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 RPL9P9-202ENST00000466501 579 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AC133134.1-201ENST00000466800 359 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 RN7SL303P-201ENST00000469773 251 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AC025465.3-201ENST00000510570 311 ntBASIC3.77□□□□□ -1.81
SEC61A2Q9H9S3 AC008958.1-201ENST00000511047 682 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms