Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 NACAP2-201ENST00000318548 624 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 RPL9P7-201ENST00000330965 580 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 Y_RNA.51-201ENST00000362725 102 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 RNU6-179P-201ENST00000363350 107 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 RNU6-282P-201ENST00000365357 103 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 SNORA9.2-201ENST00000365361 133 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 PIGFP2-201ENST00000421400 651 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 COTL1P1-201ENST00000422309 375 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC133104.1-201ENST00000429100 218 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 HMGB1P9-201ENST00000429856 646 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 RPL36AP6-201ENST00000435770 321 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 MTND4P32-201ENST00000437189 1237 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 RPL39P40-201ENST00000445481 146 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC079781.2-201ENST00000446424 169 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC079448.1-201ENST00000449377 373 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC128713.1-201ENST00000471495 306 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC126389.1-201ENST00000477436 290 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 MTCYBP20-201ENST00000524239 1129 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AP003122.3-201ENST00000526316 255 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC084851.1-201ENST00000529105 249 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 HSPE1P20-201ENST00000538133 289 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC024619.4-201ENST00000580924 316 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AL139286.2-201ENST00000606838 396 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC097065.2-201ENST00000608159 533 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC012409.4-201ENST00000612923 249 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC025034.2-201ENST00000623264 286 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC006386.2-201ENST00000624491 75 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 AC012005.1-201ENST00000624575 75 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 MIR3199-2-201ENST00000636243 86 ntBASIC2.66□□□□□ -1.98
UBQLN3Q9H347 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
UBQLN3Q9H347 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
UBQLN3Q9H347 AC110491.1-201ENST00000562191 2010 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 ELF2P3-201ENST00000445099 1506 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
UBQLN3Q9H347 RNU1-35P-201ENST00000362782 153 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
UBQLN3Q9H347 RNU6-456P-201ENST00000384493 107 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 CISD1P1-201ENST00000393907 327 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 RNU6-1025P-201ENST00000410629 104 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 RNA5SP492-201ENST00000411330 114 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 USP9YP6-201ENST00000413550 854 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.65□□□□□ -1.99
UBQLN3Q9H347 BX682237.1-201ENST00000415016 335 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AC092427.1-202ENST00000430569 476 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AC022018.1-201ENST00000430685 241 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AL591704.1-201ENST00000432574 275 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AL135938.1-201ENST00000443141 297 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AC096576.1-201ENST00000489014 359 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 RBBP4P6-201ENST00000508098 202 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AC079140.3-201ENST00000511111 550 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
UBQLN3Q9H347 RNU6-1315P-201ENST00000517187 99 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 RN7SKP40-201ENST00000517211 242 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AC025755.1-201ENST00000521306 278 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 COX6CP5-201ENST00000527162 228 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AP001646.1-201ENST00000527936 915 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.65□□□□□ -1.99
UBQLN3Q9H347 OR1M4P-201ENST00000589199 287 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AC068790.2-201ENST00000602601 557 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AC073648.5-201ENST00000603502 305 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AL670379.4-201ENST00000605279 254 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AC126118.1-201ENST00000607744 628 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AC090115.4-201ENST00000609970 188 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AC010338.1-201ENST00000621823 717 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AL157786.1-207ENST00000627771 695 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 AL137790.1-201ENST00000634283 177 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
UBQLN3Q9H347 ADAM3A-203ENST00000461344 2157 ntBASIC2.65□□□□□ -1.99
UBQLN3Q9H347 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.65□□□□□ -1.99
UBQLN3Q9H347 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 RNU6-181P-201ENST00000363225 107 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
UBQLN3Q9H347 MIR181A2-201ENST00000384863 110 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 DEFB108C-201ENST00000400154 252 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 RNU2-25P-201ENST00000411041 191 ntBASIC2.64□□□□□ -1.99
UBQLN3Q9H347 RNA5SP111-201ENST00000411386 101 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms