Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AP000949.1-201ENST00000438328 629 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 HMGN2P10-201ENST00000448085 265 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 RPL31P58-201ENST00000469001 379 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.39□□□□□ -2.19
VCX3BQ9H321 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.39□□□□□ -2.19
VCX3BQ9H321 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
VCX3BQ9H321 SNORA48.11-201ENST00000517015 89 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 RNA5SP290-201ENST00000517133 127 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 RNU6-1028P-201ENST00000517164 93 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 SNORA70.24-201ENST00000517233 118 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
VCX3BQ9H321 AC110588.1-201ENST00000559699 137 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.39□□□□□ -2.19
VCX3BQ9H321 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.39□□□□□ -2.19
VCX3BQ9H321 MTATP6P2-201ENST00000603319 678 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 AC004805.2-201ENST00000605382 482 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 TUG1_2.1-201ENST00000614234 87 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 AL136981.2-201ENST00000617319 734 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 AC084768.2-201ENST00000622736 221 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 AP003485.1-201ENST00000625093 753 ntBASIC1.39□□□□□ -2.19
VCX3BQ9H321 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.39□□□□□ -2.19
VCX3BQ9H321 AC091812.1-201ENST00000432235 1948 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
VCX3BQ9H321 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VCX3BQ9H321 SNORD46.1-201ENST00000364139 104 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 RNA5SP88-201ENST00000365560 109 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.38□□□□□ -2.19
VCX3BQ9H321 MIR95-201ENST00000385072 81 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 Y_RNA.578-201ENST00000390903 88 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 RPL26P27-201ENST00000414397 437 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.38□□□□□ -2.19
VCX3BQ9H321 UBE2V1P4-201ENST00000425374 344 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.38□□□□□ -2.19
VCX3BQ9H321 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.38□□□□□ -2.19
VCX3BQ9H321 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.38□□□□□ -2.19
VCX3BQ9H321 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 MTND5P14-201ENST00000441481 1267 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 MTND1P31-201ENST00000449206 961 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.38□□□□□ -2.19
VCX3BQ9H321 AC013267.1-201ENST00000458227 267 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 RNA5SP61-201ENST00000516453 100 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.38□□□□□ -2.19
VCX3BQ9H321 MTCO2P15-201ENST00000532655 656 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 AC087894.1-201ENST00000538359 518 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 RRN3P3-201ENST00000549207 578 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.38□□□□□ -2.19
VCX3BQ9H321 MIR3167-201ENST00000579623 85 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 AC005261.5-201ENST00000596280 355 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 SNRPGP17-201ENST00000603780 214 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.38□□□□□ -2.19
VCX3BQ9H321 AL021368.1-201ENST00000607490 540 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 U1.36-201ENST00000620684 176 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
VCX3BQ9H321 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 AC006026.1-201ENST00000444025 1803 ntBASIC1.38□□□□□ -2.19
VCX3BQ9H321 AC092447.10-201ENST00000620607 1652 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VCX3BQ9H321 SNORA80A-201ENST00000363922 136 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 Y_RNA.245-201ENST00000364493 95 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 RNU6-939P-201ENST00000384634 107 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 MIR23B-201ENST00000384832 97 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 RNA5SP171-201ENST00000391071 115 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 MTND1P21-201ENST00000412991 285 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 MTCYBP38-201ENST00000417160 1123 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 ELOCP14-201ENST00000428070 331 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 MTND1P28-201ENST00000435623 950 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 ELOCP7-201ENST00000439968 331 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 MTCO3P45-201ENST00000443036 613 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 AP001324.2-201ENST00000461163 319 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 RNU1-103P-201ENST00000516502 125 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 AC126365.2-201ENST00000580630 379 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 MIR4422-201ENST00000581938 83 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 AP002802.2-201ENST00000605877 235 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 AC107075.1-201ENST00000613695 314 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 MIR7843-201ENST00000622274 79 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 AC099063.3-201ENST00000642066 185 ntBASIC1.37□□□□□ -2.19
VCX3BQ9H321 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
VCX3BQ9H321 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.37□□□□□ -2.19
VCX3BQ9H321 Z75746.1-201ENST00000440243 2080 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 MTND4P23-201ENST00000447723 1363 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 MTND5P29-201ENST00000458676 1807 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 SNORA63.3-201ENST00000362682 132 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
VCX3BQ9H321 RNU6-432P-201ENST00000384196 109 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 MIR517C-201ENST00000385103 95 ntBASIC1.36□□□□□ -2.19
VCX3BQ9H321 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms