Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RN7SL753P-201ENST00000581238 290 ntBASIC6.67□□□□□ -1.34
RNF39Q9H2S5 MIR3614-201ENST00000581261 86 ntBASIC6.67□□□□□ -1.34
RNF39Q9H2S5 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF39Q9H2S5 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF39Q9H2S5 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF39Q9H2S5 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RNF39Q9H2S5 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 UBE2Q2P12-201ENST00000414573 204 ntBASIC6.66□□□□□ -1.34
RNF39Q9H2S5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 SNORA31.20-201ENST00000517111 133 ntBASIC6.66□□□□□ -1.34
RNF39Q9H2S5 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 MIR4675-201ENST00000577898 77 ntBASIC6.66□□□□□ -1.34
RNF39Q9H2S5 RN7SL703P-201ENST00000578485 302 ntBASIC6.66□□□□□ -1.34
RNF39Q9H2S5 MIR3117-201ENST00000584034 78 ntBASIC6.66□□□□□ -1.34
RNF39Q9H2S5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 MIR6809-201ENST00000612189 116 ntBASIC6.66□□□□□ -1.34
RNF39Q9H2S5 MIR6862-1-201ENST00000613016 70 ntBASIC6.66□□□□□ -1.34
RNF39Q9H2S5 MIR6862-2-201ENST00000614755 70 ntBASIC6.66□□□□□ -1.34
RNF39Q9H2S5 AL137067.2-201ENST00000621202 131 ntBASIC6.66□□□□□ -1.34
RNF39Q9H2S5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.66□□□□□ -1.34
RNF39Q9H2S5 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
RNF39Q9H2S5 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RNF39Q9H2S5 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF39Q9H2S5 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RNF39Q9H2S5 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
RNF39Q9H2S5 RNA5SP375-201ENST00000362975 119 ntBASIC6.65□□□□□ -1.34
RNF39Q9H2S5 SNORA68.2-201ENST00000391263 128 ntBASIC6.65□□□□□ -1.34
RNF39Q9H2S5 MIR548O-201ENST00000408583 114 ntBASIC6.65□□□□□ -1.34
RNF39Q9H2S5 HMGN2P31-201ENST00000432430 273 ntBASIC6.65□□□□□ -1.34
RNF39Q9H2S5 RN7SL193P-201ENST00000491708 276 ntBASIC6.65□□□□□ -1.34
RNF39Q9H2S5 RNU7-156P-201ENST00000517214 74 ntBASIC6.65□□□□□ -1.34
RNF39Q9H2S5 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.65□□□□□ -1.34
RNF39Q9H2S5 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF39Q9H2S5 SEPT14P17-201ENST00000617978 177 ntBASIC6.65□□□□□ -1.34
RNF39Q9H2S5 MIR6729-201ENST00000618194 65 ntBASIC6.65□□□□□ -1.34
RNF39Q9H2S5 AC245014.3-201ENST00000618589 347 ntBASIC6.65□□□□□ -1.34
RNF39Q9H2S5 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.65□□□□□ -1.34
RNF39Q9H2S5 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RNF39Q9H2S5 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RNF39Q9H2S5 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.65□□□□□ -1.35
RNF39Q9H2S5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
RNF39Q9H2S5 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC6.65□□□□□ -1.35
RNF39Q9H2S5 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
RNF39Q9H2S5 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
RNF39Q9H2S5 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.65□□□□□ -1.35
RNF39Q9H2S5 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.65□□□□□ -1.35
RNF39Q9H2S5 AC110373.1-201ENST00000505994 3505 ntBASIC6.64□□□□□ -1.35
RNF39Q9H2S5 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 RNA5SP435-201ENST00000364044 108 ntBASIC6.64□□□□□ -1.35
RNF39Q9H2S5 DCLRE1CP1-201ENST00000454630 470 ntBASIC6.64□□□□□ -1.35
RNF39Q9H2S5 RPS17P2-201ENST00000461663 408 ntBASIC6.64□□□□□ -1.35
RNF39Q9H2S5 RPS27P22-201ENST00000478056 241 ntBASIC6.64□□□□□ -1.35
RNF39Q9H2S5 HMGN1P7-201ENST00000491722 313 ntBASIC6.64□□□□□ -1.35
RNF39Q9H2S5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 AP001880.2-201ENST00000538233 448 ntBASIC6.64□□□□□ -1.35
RNF39Q9H2S5 MIR1297-201ENST00000637311 77 ntBASIC6.64□□□□□ -1.35
RNF39Q9H2S5 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
RNF39Q9H2S5 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF39Q9H2S5 AC073136.1-201ENST00000449426 2884 ntBASIC6.63□□□□□ -1.35
RNF39Q9H2S5 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RNF39Q9H2S5 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
RNF39Q9H2S5 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF39Q9H2S5 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RNF39Q9H2S5 SNORA63.2-201ENST00000362603 126 ntBASIC6.63□□□□□ -1.35
RNF39Q9H2S5 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms