Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC006026.1-201ENST00000444025 1803 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 AL359854.1-201ENST00000614203 1594 ntBASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.88□□□□□ -2.11
UPF3BQ9BZI7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 RNU6-754P-201ENST00000391166 107 ntBASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 NDUFS5P1-201ENST00000405668 289 ntBASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 EDDM3CP-201ENST00000415977 425 ntBASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 BX322784.1-201ENST00000455793 1077 ntBASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 MTND2P30-201ENST00000456663 382 ntBASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 AC005951.2-201ENST00000576282 495 ntBASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 AC024619.4-201ENST00000580924 316 ntBASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 AC002545.1-201ENST00000592511 181 ntBASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 AC007038.2-201ENST00000608095 740 ntBASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 AC109809.1-201ENST00000619665 545 ntBASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.87□□□□□ -2.11
UPF3BQ9BZI7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 SNORA23-201ENST00000365128 182 ntBASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 MIR1323-201ENST00000408090 73 ntBASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 RPS20P15-201ENST00000412792 311 ntBASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 MTND1P21-201ENST00000412991 285 ntBASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 MTCYBP38-201ENST00000417160 1123 ntBASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 BX510359.4-201ENST00000423750 193 ntBASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 AL353689.1-201ENST00000438895 199 ntBASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 snoU109.1-201ENST00000459339 135 ntBASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 AL121594.1-201ENST00000475906 575 ntBASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 AC104685.1-201ENST00000502445 371 ntBASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 AC103987.3-201ENST00000582071 292 ntBASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 AC116618.1-201ENST00000634617 774 ntBASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
UPF3BQ9BZI7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 RNY1-201ENST00000364228 113 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 RNU6-1078P-201ENST00000364522 103 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 MIR320A-201ENST00000385302 82 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 AL356432.1-201ENST00000405809 419 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 RNU2-63P-201ENST00000410792 194 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 SKA2P1-201ENST00000425592 390 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 DPRXP1-201ENST00000426312 460 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 NANOGP2-201ENST00000435391 727 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 FABP5P14-201ENST00000437273 393 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 TPRKBP1-201ENST00000456243 481 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 snoU13.8-201ENST00000458890 104 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 AC092902.1-201ENST00000486999 259 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 AC092436.3-201ENST00000511788 257 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 SNORD53B-201ENST00000577887 78 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 AC005332.6-201ENST00000613178 446 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 AC009268.2-201ENST00000621925 457 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 AL390862.1-201ENST00000635467 1469 ntBASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.85□□□□□ -2.11
UPF3BQ9BZI7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 ELOCP14-201ENST00000428070 331 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 IFNA20P-201ENST00000436840 528 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 ELOCP7-201ENST00000439968 331 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 AC093155.1-201ENST00000440164 826 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 MTND2P20-201ENST00000440805 661 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 MTND4LP16-201ENST00000440828 295 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 CBX3P7-201ENST00000532876 502 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 MRPS36P5-201ENST00000551909 298 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 HSBP1P1-201ENST00000555205 166 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 AC021739.1-201ENST00000559631 174 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 AC138915.2-201ENST00000569776 97 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 MIR3126-201ENST00000577443 74 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 AC090330.1-201ENST00000588646 764 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 AL138963.2-201ENST00000605137 226 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 AC093875.1-201ENST00000623688 504 ntBASIC1.84□□□□□ -2.11
UPF3BQ9BZI7 AC079416.3-201ENST00000624479 549 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms