Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AL122016.1-201ENST00000403365 367 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AP000567.1-201ENST00000406413 156 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 MIR1193-201ENST00000408109 78 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 RNU6-607P-201ENST00000411283 108 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AC007560.1-201ENST00000426912 237 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 TOMM20P4-201ENST00000427861 435 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 RPL12P25-201ENST00000455592 494 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 RPL30P14-201ENST00000482744 348 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 RPL21P13-201ENST00000488305 481 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AC139453.3-201ENST00000493276 369 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AC006445.2-201ENST00000510061 472 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 MIR892C-201ENST00000516410 77 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 RNU6-1069P-201ENST00000516612 133 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 RNU6-256P-201ENST00000516747 97 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 RNU6-273P-201ENST00000516937 96 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AC011611.1-201ENST00000552179 197 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 MIR3160-1-201ENST00000577972 85 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 RN7SL703P-201ENST00000578485 302 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 MIR5047-201ENST00000579212 100 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 MIR4425-201ENST00000580572 84 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 MIR5692C1-201ENST00000585309 91 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AL117336.2-201ENST00000602435 335 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AL355598.1-201ENST00000604169 202 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AC008962.1-201ENST00000605729 304 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AC002044.1-201ENST00000606707 158 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 RMST_8.1-201ENST00000610287 165 ntBASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM54Q9BYV2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 RNU6-1035P-201ENST00000384477 107 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 Y_RNA.529-201ENST00000384586 119 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 HMGN2P30-201ENST00000423237 256 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 MYL8P-204ENST00000431574 518 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 NDUFB1P1-201ENST00000435191 180 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 AL590664.1-201ENST00000448065 339 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 AC117503.1-201ENST00000472241 394 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 RN7SKP21-201ENST00000516503 220 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 RNU6-572P-201ENST00000516724 80 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 SNORA31.19-201ENST00000517079 126 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 AC009902.1-201ENST00000519351 183 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 AC105029.1-201ENST00000520250 669 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 RNU6-323P-201ENST00000521915 107 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 MIR3609-201ENST00000582661 80 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 MIR3942-201ENST00000585264 109 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 AC073544.1-201ENST00000600110 1595 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 AC104237.2-201ENST00000612456 443 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 RMST_4.1-201ENST00000616886 107 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 AL359314.1-201ENST00000616913 261 ntBASIC3.57□□□□□ -1.84
TRIM54Q9BYV2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 Y_RNA.61-201ENST00000362835 102 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 SNORA75B-201ENST00000384053 137 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 MIR184-201ENST00000384962 84 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 Y_RNA.623-201ENST00000411128 95 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 AC098614.2-201ENST00000426040 255 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 AL158071.1-201ENST00000430315 461 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 AC005019.1-201ENST00000436455 431 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 HMGB1P18-201ENST00000438801 619 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 BRK1P2-201ENST00000442875 223 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 AL078601.1-201ENST00000444542 271 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 NDUFB1P2-201ENST00000449477 176 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 AL583843.1-201ENST00000456070 346 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 AC087884.1-201ENST00000469738 328 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 RPL32P34-201ENST00000486380 400 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 MTCO1P29-201ENST00000496868 288 ntBASIC3.56□□□□□ -1.84
TRIM54Q9BYV2 RNU2-27P-201ENST00000516185 142 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms