Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 PMCHL1-202ENST00000423102 261 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 Z82210.1-201ENST00000440037 231 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AC025750.2-201ENST00000442609 450 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AC008264.1-201ENST00000447612 367 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AC084357.1-201ENST00000473404 255 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 DEFB109F-201ENST00000491870 277 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AC079140.5-201ENST00000507882 310 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 PHBP14-201ENST00000512887 367 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 RNU6-864P-201ENST00000516256 108 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 RNU6-1282P-201ENST00000516735 96 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 RNA5SP290-201ENST00000517133 127 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AC090281.1-201ENST00000523019 276 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 MIR3668-201ENST00000582138 75 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 MIR3941-201ENST00000582572 103 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AC098826.3-201ENST00000603823 466 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AC006077.1-201ENST00000604746 343 ntBASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LRFN3Q9BTN0 AL359693.1-201ENST00000614959 2407 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 MIR448-201ENST00000362131 111 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 RNU6-1309P-201ENST00000363305 108 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.197-201ENST00000364004 102 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 U3.12-201ENST00000364498 214 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 RNU6-308P-201ENST00000390957 107 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 CISD1P1-201ENST00000393907 327 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AL592114.1-201ENST00000403842 483 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.605-201ENST00000410577 105 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AC007919.1-201ENST00000429380 217 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 RPS26P2-201ENST00000440331 348 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AC010469.1-201ENST00000463864 576 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 RNA5SP446-201ENST00000515955 82 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.673-201ENST00000516306 88 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.682-201ENST00000516457 100 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AC022695.1-201ENST00000522089 237 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 APOOP3-201ENST00000536787 586 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 MIR4424-201ENST00000585257 86 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AL161798.1-201ENST00000604630 131 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AC010201.1-201ENST00000605051 540 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AL033523.1-201ENST00000605153 153 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 CTHRC1P1-201ENST00000605383 469 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 uc_338.34-201ENST00000617467 174 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 uc_338.22-201ENST00000622722 187 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AC007823.1-201ENST00000569932 1566 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AF117829.1-206ENST00000621883 3802 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 AC118273.1-201ENST00000525324 3006 ntBASIC3.87□□□□□ -1.79
LRFN3Q9BTN0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.414-201ENST00000384011 101 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 RNU6-196P-201ENST00000384315 107 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 MTCYBP4-201ENST00000401524 249 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 MIR548F5-201ENST00000408421 86 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AL160275.3-201ENST00000423876 471 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AL121890.1-201ENST00000435457 205 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 HMGB3P11-201ENST00000440127 604 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AL356535.1-201ENST00000440335 398 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 PIGFP3-201ENST00000441918 722 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 RNU7-180P-201ENST00000459240 63 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 RNU7-66P-201ENST00000459469 62 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 RPL9P32-201ENST00000464118 620 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 RN7SL504P-201ENST00000494496 287 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AC104136.1-201ENST00000512969 394 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms