Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC110079.1-202ENST00000635213 138 ntBASIC2.64□□□□□ -1.99
CCM2Q9BSQ5 AL512643.1-201ENST00000635735 524 ntBASIC2.64□□□□□ -1.99
CCM2Q9BSQ5 FO624990.1-201ENST00000636373 85 ntBASIC2.64□□□□□ -1.99
CCM2Q9BSQ5 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCM2Q9BSQ5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCM2Q9BSQ5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC010680.1-201ENST00000590024 3590 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 RNU6-859P-201ENST00000362728 107 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 RNA5SP393-201ENST00000363423 117 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 RNU1-105P-201ENST00000363470 161 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 RNU6-190P-201ENST00000384154 102 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 MIR558-201ENST00000384920 94 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 MIR627-201ENST00000384979 97 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 MIR767-201ENST00000390228 109 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 RNA5SP184-201ENST00000411071 108 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC114491.1-201ENST00000416095 246 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 SNORD109B-201ENST00000458961 67 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 SNORD109A-201ENST00000459128 67 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC008571.1-201ENST00000467232 300 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 RPS27AP9-201ENST00000477681 438 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 RPS15AP34-201ENST00000487776 387 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC105252.1-201ENST00000503089 286 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 SUMO2P6-201ENST00000505273 288 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 MTND4P2-201ENST00000507767 1203 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC114786.4-201ENST00000508771 728 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC117522.1-201ENST00000509821 380 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC117522.2-201ENST00000510049 657 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 ELOCP31-201ENST00000540463 467 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC012213.3-201ENST00000577199 777 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AP005136.1-201ENST00000579765 429 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 NBR2-204ENST00000587322 63 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC245014.2-201ENST00000603689 287 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AP000787.2-201ENST00000604432 568 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC246785.4-201ENST00000605374 287 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 AC072046.2-201ENST00000618366 268 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 SCARNA15.3-201ENST00000626315 122 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 SCARNA4.1-201ENST00000628597 123 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 Z99571.1-201ENST00000636677 394 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCM2Q9BSQ5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 AL390237.1-201ENST00000404226 1415 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 RNU6-348P-201ENST00000384386 107 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 MED13P1-201ENST00000428342 171 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 AL031667.1-201ENST00000440222 725 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 KLF3P2-201ENST00000465138 268 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 RPL36AP51-201ENST00000487216 318 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 AC139453.3-201ENST00000493276 369 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 RPS27P26-201ENST00000494583 239 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 SCARNA24.1-201ENST00000516465 137 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 RNU1-103P-201ENST00000516502 125 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 OR5B19P-201ENST00000531766 928 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 MIR4528-201ENST00000577763 90 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 AL035413.2-201ENST00000604801 525 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 DUSP12P1-201ENST00000612874 516 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 AC068880.5-201ENST00000624331 290 ntBASIC2.62□□□□□ -1.99
CCM2Q9BSQ5 AL359693.1-201ENST00000614959 2407 ntBASIC2.61□□□□□ -1.99
CCM2Q9BSQ5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CCM2Q9BSQ5 ZNF519P1-201ENST00000449011 1626 ntBASIC2.61□□□□□ -1.99
CCM2Q9BSQ5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.61□□□□□ -1.99
CCM2Q9BSQ5 SNORA75-201ENST00000384158 137 ntBASIC2.61□□□□□ -1.99
CCM2Q9BSQ5 AL356057.3-201ENST00000402607 340 ntBASIC2.61□□□□□ -1.99
CCM2Q9BSQ5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.61□□□□□ -1.99
CCM2Q9BSQ5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.61□□□□□ -1.99
CCM2Q9BSQ5 AL353706.1-201ENST00000436728 494 ntBASIC2.61□□□□□ -1.99
CCM2Q9BSQ5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms