Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RN7SKP100-201ENST00000411258 284 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 RPL21P38-201ENST00000418090 167 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 AC008897.1-201ENST00000494006 347 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 SNORA81.3-201ENST00000517283 198 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 AL110118.1-201ENST00000553543 400 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 MIR4270-201ENST00000581799 70 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 AL391358.1-201ENST00000605342 190 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 AC091979.2-201ENST00000607514 214 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 AC006971.1-201ENST00000407916 4486 ntBASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM56Q9BRZ2 NCAPGP1-201ENST00000505112 1814 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AP000560.1-201ENST00000624150 1937 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AC079741.1-201ENST00000321498 212 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 MIR34A-201ENST00000385130 110 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AL592148.1-201ENST00000413568 445 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 RN7SKP210-201ENST00000459176 261 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 MED28P2-201ENST00000475771 317 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AC078918.1-201ENST00000498515 228 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AC074250.1-201ENST00000511117 192 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AC067942.3-201ENST00000512025 362 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AC023141.12-201ENST00000512399 199 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 SNORA70.16-201ENST00000516390 95 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AL590705.4-201ENST00000532209 134 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 TRAV28-201ENST00000557548 323 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AC091042.1-201ENST00000579213 173 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 MIR3667-201ENST00000581025 74 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AC006077.1-201ENST00000604746 343 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AP001282.2-201ENST00000616149 309 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AC112200.1-201ENST00000625015 234 ntBASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRIM56Q9BRZ2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 AC021146.4-201ENST00000309229 279 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 Y_RNA.29-201ENST00000362570 113 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 Y_RNA.84-201ENST00000363011 104 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 Y_RNA.105-201ENST00000363182 111 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-121P-201ENST00000410525 99 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 RNA5SP494-201ENST00000410653 129 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-130P-201ENST00000411112 103 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 SDAD1P3-201ENST00000427380 333 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 AL513124.1-201ENST00000450410 614 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 ISCUP1-201ENST00000454451 448 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 RN7SL459P-201ENST00000481078 302 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 AC078817.1-201ENST00000492623 435 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 Vault.1-201ENST00000516474 102 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 RNU5B-3P-201ENST00000516601 115 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 AF186190.1-201ENST00000517470 480 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 IGKV2-23-201ENST00000518729 323 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 AC022080.3-201ENST00000544433 482 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 MIR4697-201ENST00000582977 78 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 AC073410.2-201ENST00000603240 332 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 AC009318.2-201ENST00000610917 651 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 AP000346.3-201ENST00000622821 210 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 MIR7641-1-201ENST00000627518 61 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 U2.22-201ENST00000636441 106 ntBASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM56Q9BRZ2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 AL391987.6-201ENST00000305671 199 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 Y_RNA.352-201ENST00000365439 102 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-338P-201ENST00000383888 105 ntBASIC4.6□□□□□ -1.67
TRIM56Q9BRZ2 RNU6-1279P-201ENST00000383917 103 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms