Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.59□□□□□ -1.83
VRK1Q99986 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.59□□□□□ -1.83
VRK1Q99986 AC011602.1-201ENST00000546484 331 ntBASIC3.59□□□□□ -1.83
VRK1Q99986 HIGD1AP1-201ENST00000550979 275 ntBASIC3.59□□□□□ -1.83
VRK1Q99986 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.59□□□□□ -1.83
VRK1Q99986 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.59□□□□□ -1.83
VRK1Q99986 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.59□□□□□ -1.83
VRK1Q99986 MIR6076-201ENST00000617521 113 ntBASIC3.59□□□□□ -1.83
VRK1Q99986 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.59□□□□□ -1.83
VRK1Q99986 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VRK1Q99986 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
VRK1Q99986 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
VRK1Q99986 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.59□□□□□ -1.84
VRK1Q99986 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.59□□□□□ -1.84
VRK1Q99986 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VRK1Q99986 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VRK1Q99986 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.58□□□□□ -1.84
VRK1Q99986 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VRK1Q99986 SRP72P2-201ENST00000344851 1979 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
VRK1Q99986 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.58□□□□□ -1.84
VRK1Q99986 MIR372-201ENST00000362225 67 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 RNA5SP283-201ENST00000365604 119 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 SNORD116-29-201ENST00000384516 83 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 MIR10A-201ENST00000385043 110 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 SNORD66.1-201ENST00000391230 76 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.58□□□□□ -1.84
VRK1Q99986 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
VRK1Q99986 AL590632.1-201ENST00000424289 371 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 AL158071.1-201ENST00000430315 461 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 AL117339.2-201ENST00000430475 180 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 AC007677.1-201ENST00000445757 515 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 RNU7-152P-201ENST00000458982 64 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 AL049830.2-201ENST00000480072 201 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 AL132838.2-201ENST00000492041 314 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.58□□□□□ -1.84
VRK1Q99986 AC116337.1-201ENST00000509680 687 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 RNU1-103P-201ENST00000516502 125 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 AC006064.5-201ENST00000541782 248 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.58□□□□□ -1.84
VRK1Q99986 MIR1254-2-201ENST00000579553 63 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 MIR3609-201ENST00000582661 80 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 AC012468.1-201ENST00000604888 430 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 ELOCP5-201ENST00000604924 333 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 MIR6867-201ENST00000610636 67 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 RNA5SP196-201ENST00000625967 102 ntBASIC3.58□□□□□ -1.84
VRK1Q99986 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.58□□□□□ -1.84
VRK1Q99986 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.58□□□□□ -1.84
VRK1Q99986 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VRK1Q99986 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VRK1Q99986 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
VRK1Q99986 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VRK1Q99986 AF117829.1-206ENST00000621883 3802 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
VRK1Q99986 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.57□□□□□ -1.84
VRK1Q99986 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VRK1Q99986 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
VRK1Q99986 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.57□□□□□ -1.84
VRK1Q99986 RNA5SP130-201ENST00000364431 114 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.57□□□□□ -1.84
VRK1Q99986 RNU1-73P-201ENST00000383971 164 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 RNU6-601P-201ENST00000384540 107 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 RPL21P65-201ENST00000406094 466 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 RNU6-370P-201ENST00000411008 104 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 RNU6-293P-201ENST00000411259 106 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VRK1Q99986 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.57□□□□□ -1.84
VRK1Q99986 HMGN2P30-201ENST00000423237 256 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VRK1Q99986 TOMM20P4-201ENST00000427861 435 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 AC018644.1-201ENST00000429934 551 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
VRK1Q99986 AL590664.1-201ENST00000448065 339 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 HMGB3P8-201ENST00000449709 577 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.57□□□□□ -1.84
VRK1Q99986 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VRK1Q99986 RPL32P34-201ENST00000486380 400 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VRK1Q99986 AC006445.2-201ENST00000510061 472 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.57□□□□□ -1.84
VRK1Q99986 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.57□□□□□ -1.84
VRK1Q99986 RNU6-1016P-201ENST00000516689 94 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.57□□□□□ -1.84
VRK1Q99986 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VRK1Q99986 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
VRK1Q99986 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.57□□□□□ -1.84
VRK1Q99986 APOOP3-201ENST00000536787 586 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.57□□□□□ -1.84
VRK1Q99986 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VRK1Q99986 CYCSP39-201ENST00000565821 309 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 AC106785.1-201ENST00000565935 262 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 MIR4782-201ENST00000577987 79 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 MIR4286-201ENST00000580651 93 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 RN7SL600P-201ENST00000581811 299 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 MIR5690-201ENST00000583739 73 ntBASIC3.57□□□□□ -1.84
VRK1Q99986 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.57□□□□□ -1.84
VRK1Q99986 AC123912.5-201ENST00000605470 343 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms