Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.05□□□□□ -2.08
CDX2Q99626 AC048344.4-201ENST00000619744 527 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 MTND1P37-201ENST00000636562 264 ntBASIC2.05□□□□□ -2.08
CDX2Q99626 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CDX2Q99626 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.05□□□□□ -2.08
CDX2Q99626 RNU6-461P-201ENST00000364195 107 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CDX2Q99626 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.04□□□□□ -2.08
CDX2Q99626 AL513475.1-201ENST00000406602 315 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 USP9YP33-201ENST00000412220 421 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.04□□□□□ -2.08
CDX2Q99626 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.04□□□□□ -2.08
CDX2Q99626 AL445669.1-201ENST00000426743 755 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 AC084290.1-201ENST00000434995 374 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 USP9YP35-201ENST00000435696 412 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 AL445687.1-201ENST00000439946 251 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.04□□□□□ -2.08
CDX2Q99626 DDX10P1-201ENST00000448545 1933 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CDX2Q99626 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.04□□□□□ -2.08
CDX2Q99626 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.04□□□□□ -2.08
CDX2Q99626 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.04□□□□□ -2.08
CDX2Q99626 AC093809.1-201ENST00000509155 340 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 RN7SKP265-201ENST00000516448 223 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.04□□□□□ -2.08
CDX2Q99626 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.04□□□□□ -2.08
CDX2Q99626 AC011604.1-201ENST00000545978 196 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.04□□□□□ -2.08
CDX2Q99626 AL391261.3-201ENST00000557194 520 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.04□□□□□ -2.08
CDX2Q99626 TPMTP1-201ENST00000592307 737 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.04□□□□□ -2.08
CDX2Q99626 AC004987.4-201ENST00000603383 338 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 AL139344.1-201ENST00000605228 195 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 AC013244.3-201ENST00000605614 388 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 AC092106.3-201ENST00000611308 722 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDX2Q99626 TUG1_2.1-201ENST00000614234 87 ntBASIC2.04□□□□□ -2.08
CDX2Q99626 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CDX2Q99626 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CDX2Q99626 MTND5P33-201ENST00000571250 1450 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 RNU6-462P-201ENST00000362659 105 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 RNU1-105P-201ENST00000363470 161 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 RNU6-906P-201ENST00000384700 70 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 U3.20-201ENST00000390909 217 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.03□□□□□ -2.08
CDX2Q99626 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.03□□□□□ -2.08
CDX2Q99626 HMGB1P11-201ENST00000413899 637 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.03□□□□□ -2.08
CDX2Q99626 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.03□□□□□ -2.08
CDX2Q99626 USP9YP24-201ENST00000434374 697 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 USP9YP17-201ENST00000444617 696 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 TPT1P14-201ENST00000448018 505 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 RPS20P20-201ENST00000460498 340 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 AC087588.1-201ENST00000462203 316 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 RPL31P41-201ENST00000477967 372 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 MRPL42P6-201ENST00000486397 371 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.03□□□□□ -2.08
CDX2Q99626 AC093534.1-201ENST00000504977 132 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 MRPS36P3-201ENST00000519284 130 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
CDX2Q99626 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.03□□□□□ -2.08
CDX2Q99626 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.03□□□□□ -2.08
CDX2Q99626 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.03□□□□□ -2.08
CDX2Q99626 AC136618.2-201ENST00000575091 400 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.03□□□□□ -2.08
CDX2Q99626 MIR5089-201ENST00000580047 84 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.03□□□□□ -2.08
CDX2Q99626 AL161729.4-201ENST00000604650 476 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 UCA1.1-201ENST00000620952 75 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 AC120349.3-201ENST00000624377 529 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 AC019226.1-201ENST00000625666 515 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 AC019226.2-201ENST00000625973 424 ntBASIC2.03□□□□□ -2.08
CDX2Q99626 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.03□□□□□ -2.08
CDX2Q99626 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CDX2Q99626 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
CDX2Q99626 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.03□□□□□ -2.09
CDX2Q99626 MTND5P35-201ENST00000557537 1720 ntBASIC2.03□□□□□ -2.09
CDX2Q99626 CR848007.1-201ENST00000442354 1699 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.02□□□□□ -2.09
CDX2Q99626 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CDX2Q99626 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CDX2Q99626 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDX2Q99626 RNU6-433P-201ENST00000363216 104 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 U8.8-201ENST00000365399 135 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 RNU1-52P-201ENST00000384190 164 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 MIR9-3-201ENST00000385084 90 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 MIR513B-201ENST00000385136 84 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 MIR524-201ENST00000385242 87 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 AF228730.1-201ENST00000397972 663 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 AL513331.1-201ENST00000411908 397 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.02□□□□□ -2.09
CDX2Q99626 RPL7L1P10-201ENST00000427790 463 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 GTF2IP20-201ENST00000431663 360 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.02□□□□□ -2.09
CDX2Q99626 AL049734.2-201ENST00000441066 616 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.02□□□□□ -2.09
CDX2Q99626 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.02□□□□□ -2.09
CDX2Q99626 AC092155.2-201ENST00000454675 477 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms