Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.77□□□□□ -2.13
VAT1Q99536 AC005410.1-202ENST00000460347 485 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.77□□□□□ -2.13
VAT1Q99536 RPL23AP41-201ENST00000484754 458 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 AC021146.8-201ENST00000507455 733 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 SNORA19.3-201ENST00000516165 130 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.77□□□□□ -2.13
VAT1Q99536 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.77□□□□□ -2.13
VAT1Q99536 AC104581.2-201ENST00000572227 430 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 AC091057.3-201ENST00000602684 733 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 AP003400.5-201ENST00000624827 617 ntBASIC1.77□□□□□ -2.13
VAT1Q99536 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
VAT1Q99536 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
VAT1Q99536 MIR19A-201ENST00000384878 82 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 USP9YP33-201ENST00000412220 421 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 RPL23AP39-201ENST00000415533 405 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.76□□□□□ -2.13
VAT1Q99536 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.76□□□□□ -2.13
VAT1Q99536 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.76□□□□□ -2.13
VAT1Q99536 USP9YP35-201ENST00000435696 412 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.76□□□□□ -2.13
VAT1Q99536 MTCO1P27-201ENST00000448269 226 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 OR6C5P-201ENST00000452388 923 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 AC079395.1-201ENST00000510981 262 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 SMURF2P1-201ENST00000514992 481 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 RNU6-581P-201ENST00000516214 105 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 RNU2-44P-201ENST00000516795 194 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 RNU2-19P-201ENST00000517288 84 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 AP000889.1-201ENST00000530968 660 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
VAT1Q99536 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.76□□□□□ -2.13
VAT1Q99536 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.76□□□□□ -2.13
VAT1Q99536 MIR4255-201ENST00000579351 72 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 AP001269.3-201ENST00000588718 329 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 AC012493.3-201ENST00000604494 112 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 AF129408.1-201ENST00000608767 431 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 AL627230.6-201ENST00000611129 280 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 AL121895.2-201ENST00000619558 447 ntBASIC1.76□□□□□ -2.13
VAT1Q99536 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.76□□□□□ -2.13
VAT1Q99536 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.76□□□□□ -2.13
VAT1Q99536 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.76□□□□□ -2.13
VAT1Q99536 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.76□□□□□ -2.13
VAT1Q99536 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
VAT1Q99536 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VAT1Q99536 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.75□□□□□ -2.13
VAT1Q99536 SNORD116-12-201ENST00000384468 92 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 SNORA40.18-201ENST00000391200 128 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 MTCO1P17-201ENST00000411522 491 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.75□□□□□ -2.13
VAT1Q99536 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.75□□□□□ -2.13
VAT1Q99536 USP9YP10-201ENST00000454868 628 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VAT1Q99536 AC034222.1-201ENST00000494052 532 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.75□□□□□ -2.13
VAT1Q99536 MRPS17P9-201ENST00000511924 393 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 SNORA25.11-201ENST00000515935 105 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.75□□□□□ -2.13
VAT1Q99536 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.75□□□□□ -2.13
VAT1Q99536 AC012435.1-202ENST00000568772 240 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 AC090079.2-201ENST00000575289 768 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 MIR3945-201ENST00000581853 98 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.75□□□□□ -2.13
VAT1Q99536 AL109918.3-201ENST00000603072 338 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 MTCYBP22-201ENST00000603788 447 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 AC007038.2-201ENST00000608095 740 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 AC004908.2-201ENST00000609090 574 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 AC092574.1-201ENST00000609771 420 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 AC245297.2-201ENST00000610119 565 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
VAT1Q99536 AC116618.1-201ENST00000634617 774 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VAT1Q99536 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.75□□□□□ -2.13
VAT1Q99536 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
VAT1Q99536 Z75746.1-201ENST00000440243 2080 ntBASIC1.75□□□□□ -2.13
VAT1Q99536 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
VAT1Q99536 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VAT1Q99536 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
VAT1Q99536 RNU6-413P-201ENST00000384115 107 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 USP9YP6-201ENST00000413550 854 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 AC104651.1-201ENST00000427559 735 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.74□□□□□ -2.13
VAT1Q99536 AC005094.1-201ENST00000440420 368 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.74□□□□□ -2.13
VAT1Q99536 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.74□□□□□ -2.13
VAT1Q99536 AC007327.1-201ENST00000447461 264 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 AC092001.1-201ENST00000453012 261 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 RNU7-59P-201ENST00000459101 61 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 AC104564.1-201ENST00000493028 407 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 RPF2P2-201ENST00000504693 896 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 MTND4P2-201ENST00000507767 1203 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.74□□□□□ -2.13
VAT1Q99536 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.74□□□□□ -2.13
VAT1Q99536 SNORA31.3-201ENST00000516029 96 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
VAT1Q99536 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.74□□□□□ -2.13
VAT1Q99536 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.74□□□□□ -2.13
VAT1Q99536 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.74□□□□□ -2.13
VAT1Q99536 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.74□□□□□ -2.13
VAT1Q99536 AC007229.1-201ENST00000590455 412 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 BNIP3P23-201ENST00000599655 511 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms