Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 MTND2P29-201ENST00000438595 412 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AL161651.1-201ENST00000440882 223 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 MTCO1P53-201ENST00000441633 699 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AL161788.1-201ENST00000441805 169 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 MOB1AP2-201ENST00000446060 614 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 OFD1P3Y-201ENST00000453312 783 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AC026410.2-201ENST00000460281 156 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AC117503.1-201ENST00000472241 394 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 RPL21P47-201ENST00000483696 477 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AC006199.1-201ENST00000548728 219 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.27□□□□□ -2.21
LYSMD1Q96S90 MIR3198-2-201ENST00000577868 80 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AC026271.5-201ENST00000577873 130 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AC023043.2-201ENST00000589678 1026 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AC004805.2-201ENST00000605382 482 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AC006338.1-201ENST00000618453 749 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 AC002550.2-201ENST00000621246 394 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
LYSMD1Q96S90 Z75746.1-201ENST00000440243 2080 ntBASIC1.27□□□□□ -2.21
LYSMD1Q96S90 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
LYSMD1Q96S90 RNU6-1066P-201ENST00000363573 105 ntBASIC1.26□□□□□ -2.21
LYSMD1Q96S90 SNORA25B-201ENST00000365507 128 ntBASIC1.26□□□□□ -2.21
LYSMD1Q96S90 MIR95-201ENST00000385072 81 ntBASIC1.26□□□□□ -2.21
LYSMD1Q96S90 MIR561-201ENST00000385216 97 ntBASIC1.26□□□□□ -2.21
LYSMD1Q96S90 Y_RNA.595-201ENST00000410403 105 ntBASIC1.26□□□□□ -2.21
LYSMD1Q96S90 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.26□□□□□ -2.21
LYSMD1Q96S90 AC244453.4-201ENST00000419150 388 ntBASIC1.26□□□□□ -2.21
LYSMD1Q96S90 AC114878.1-201ENST00000441166 358 ntBASIC1.26□□□□□ -2.21
LYSMD1Q96S90 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.26□□□□□ -2.21
LYSMD1Q96S90 HMGN2P10-201ENST00000448085 265 ntBASIC1.26□□□□□ -2.21
LYSMD1Q96S90 Y_RNA.638-201ENST00000459374 113 ntBASIC1.26□□□□□ -2.21
LYSMD1Q96S90 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.26□□□□□ -2.21
LYSMD1Q96S90 RNA5SP290-201ENST00000517133 127 ntBASIC1.26□□□□□ -2.21
LYSMD1Q96S90 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.26□□□□□ -2.21
LYSMD1Q96S90 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.26□□□□□ -2.21
LYSMD1Q96S90 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.26□□□□□ -2.21
LYSMD1Q96S90 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.26□□□□□ -2.21
LYSMD1Q96S90 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.26□□□□□ -2.21
LYSMD1Q96S90 AC073413.2-201ENST00000604332 360 ntBASIC1.26□□□□□ -2.21
LYSMD1Q96S90 AL118556.2-201ENST00000614375 824 ntBASIC1.26□□□□□ -2.21
LYSMD1Q96S90 AC021755.4-201ENST00000616620 456 ntBASIC1.26□□□□□ -2.21
LYSMD1Q96S90 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.26□□□□□ -2.21
LYSMD1Q96S90 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.25□□□□□ -2.21
LYSMD1Q96S90 MIR217-201ENST00000384817 110 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
LYSMD1Q96S90 MTCO3P46-201ENST00000425787 232 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 NANOGP2-201ENST00000435391 727 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 PTGES3P1-201ENST00000439531 483 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 AL691517.1-201ENST00000440833 1235 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 RNFT1P2-201ENST00000443064 757 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.25□□□□□ -2.21
LYSMD1Q96S90 RNU7-140P-201ENST00000459546 60 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 AC021146.2-201ENST00000504736 556 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.25□□□□□ -2.21
LYSMD1Q96S90 AC034114.1-201ENST00000520293 285 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 ARL2BPP2-201ENST00000550907 489 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 AL160236.1-201ENST00000556317 195 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.25□□□□□ -2.21
LYSMD1Q96S90 ROCK1P1-201ENST00000573767 549 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 AC090615.1-201ENST00000577519 154 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.25□□□□□ -2.21
LYSMD1Q96S90 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.25□□□□□ -2.21
LYSMD1Q96S90 AC107075.1-201ENST00000613695 314 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 AC092192.1-201ENST00000633154 1018 ntBASIC1.25□□□□□ -2.21
LYSMD1Q96S90 AL138713.1-201ENST00000624026 2130 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 AL391987.6-201ENST00000305671 199 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 RNU1-62P-201ENST00000362599 164 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 RNU1-39P-201ENST00000383897 165 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
LYSMD1Q96S90 FGF7P8-201ENST00000402994 292 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 RNU6-575P-201ENST00000411326 105 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 TPMTP3-201ENST00000411928 735 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.24□□□□□ -2.21
LYSMD1Q96S90 AC097463.2-201ENST00000421074 142 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 PTGES3P4-201ENST00000426243 356 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.24□□□□□ -2.21
LYSMD1Q96S90 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.24□□□□□ -2.21
LYSMD1Q96S90 RPS15AP17-201ENST00000470598 390 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 AC108729.2-201ENST00000476543 840 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 AC018437.1-201ENST00000492214 406 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 SNORA48.11-201ENST00000517015 89 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.24□□□□□ -2.21
LYSMD1Q96S90 AP001004.1-201ENST00000582468 324 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.24□□□□□ -2.21
LYSMD1Q96S90 BNIP3P23-201ENST00000599655 511 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 BNIP3P10-201ENST00000605360 577 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.24□□□□□ -2.21
LYSMD1Q96S90 AC011939.3-201ENST00000613686 466 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 AC087821.2-201ENST00000637086 450 ntBASIC1.24□□□□□ -2.21
LYSMD1Q96S90 SUGT1P1-201ENST00000379514 476 ntBASIC1.23□□□□□ -2.21
LYSMD1Q96S90 USP9YP6-201ENST00000413550 854 ntBASIC1.23□□□□□ -2.21
LYSMD1Q96S90 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
LYSMD1Q96S90 EIF4EP2-201ENST00000422816 654 ntBASIC1.23□□□□□ -2.21
LYSMD1Q96S90 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms