Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 OR5B19P-201ENST00000531766 928 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 AC025281.1-201ENST00000567026 265 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 PIGPP4-201ENST00000584447 307 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 AL590229.1-201ENST00000603497 542 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 SEPT7P9-203ENST00000604116 343 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 AC068276.1-201ENST00000605793 379 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 AL121992.2-201ENST00000606262 256 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 AC012360.2-201ENST00000609349 391 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 AC010678.1-201ENST00000614118 713 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 AC008250.2-201ENST00000615261 205 ntBASIC1.88□□□□□ -2.11
LINC00477Q96M19 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.88□□□□□ -2.11
LINC00477Q96M19 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LINC00477Q96M19 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LINC00477Q96M19 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
LINC00477Q96M19 RNU6-859P-201ENST00000362728 107 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 RNU6-288P-201ENST00000363690 104 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 RNU6-169P-201ENST00000365336 107 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 U8.8-201ENST00000365399 135 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 SNORD116-9-201ENST00000384000 95 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 SNORD116-3-201ENST00000384287 95 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 SNORD116-7-201ENST00000384404 95 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 SNORD116-5-201ENST00000384462 95 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 MIR491-201ENST00000384877 84 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AL162578.1-201ENST00000406202 378 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 Y_RNA.598-201ENST00000410480 95 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 BX295541.1-201ENST00000417774 250 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC092047.1-201ENST00000424997 240 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 DLGAP5P1-201ENST00000430307 464 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 USP9YP14-201ENST00000430663 563 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 RPL31P35-201ENST00000431058 377 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC098826.1-201ENST00000433943 471 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 CR769767.1-201ENST00000436337 346 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AL353706.1-201ENST00000436728 494 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC105272.1-201ENST00000438604 198 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC079448.1-201ENST00000449377 373 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 CECR9-201ENST00000453421 199 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 MTND2P24-201ENST00000453434 806 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC128713.1-201ENST00000471495 306 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC004924.1-201ENST00000480160 781 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 RPS27P27-201ENST00000498779 255 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC079140.3-201ENST00000511111 550 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 MTCO3P28-201ENST00000513351 515 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 MIR4528-201ENST00000577763 90 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 MTND1P15-201ENST00000579262 949 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 BNIP3P8-201ENST00000597863 560 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 AL355877.2-201ENST00000603670 358 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AL161798.1-201ENST00000604630 131 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC064872.1-201ENST00000604823 1072 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 MTND4LP5-201ENST00000605152 292 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC080013.6-201ENST00000606185 215 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC006566.1-201ENST00000608943 513 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC092608.2-201ENST00000624427 218 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC006386.2-201ENST00000624491 75 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC012005.1-201ENST00000624575 75 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC110994.2-201ENST00000635481 492 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 AC090582.1-201ENST00000636321 199 ntBASIC1.87□□□□□ -2.11
LINC00477Q96M19 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.87□□□□□ -2.11
LINC00477Q96M19 AL049641.1-201ENST00000441055 1948 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 RNU4-40P-201ENST00000364351 143 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 SNORD114-30-201ENST00000364448 72 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 SNORA70.4-201ENST00000365509 134 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 RNU5E-6P-201ENST00000365574 115 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 SNORA75B-201ENST00000384053 137 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 MIR27B-201ENST00000385129 97 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LINC00477Q96M19 RNU2-33P-201ENST00000410344 192 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 RNU2-52P-201ENST00000410680 190 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 ELOCP17-201ENST00000414751 326 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AL031779.1-201ENST00000415663 330 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 MTCO2P34-201ENST00000421994 607 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 SKA2P1-201ENST00000425592 390 ntBASIC1.86□□□□□ -2.11
LINC00477Q96M19 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.86□□□□□ -2.11
LINC00477Q96M19 GTF2IP20-201ENST00000431663 360 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms