Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHDQ96IW2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.31□□□□□ -1.72
SHDQ96IW2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHDQ96IW2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.31□□□□□ -1.72
SHDQ96IW2 AC018529.3-201ENST00000624212 2254 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.3□□□□□ -1.72
SHDQ96IW2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHDQ96IW2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHDQ96IW2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHDQ96IW2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.3□□□□□ -1.72
SHDQ96IW2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SHDQ96IW2 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHDQ96IW2 RNA5SP307-201ENST00000362863 116 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 Y_RNA.158-201ENST00000363651 101 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 RNU6-1317P-201ENST00000364582 104 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 RNU1-115P-201ENST00000365329 160 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 MRPL42P3-201ENST00000401492 326 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 HSPE1P26-201ENST00000405341 275 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 RNU6-174P-201ENST00000410406 106 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 RN7SKP53-201ENST00000411337 315 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 AC008267.5-201ENST00000424928 265 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 AC124916.1-201ENST00000444020 547 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.3□□□□□ -1.72
SHDQ96IW2 HMGB3P8-201ENST00000449709 577 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.3□□□□□ -1.72
SHDQ96IW2 MTND5P22-201ENST00000458380 195 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.3□□□□□ -1.72
SHDQ96IW2 AC069499.1-201ENST00000489433 509 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 AC015911.1-201ENST00000495111 156 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 RNU1-103P-201ENST00000516502 125 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 RNU6-703P-201ENST00000516946 107 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 Y_RNA.720-201ENST00000517166 92 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 AC010653.1-201ENST00000571108 881 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 AL139395.1-201ENST00000603662 160 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 AC019176.2-201ENST00000611579 315 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 AC008121.3-201ENST00000618726 433 ntBASIC4.3□□□□□ -1.72
SHDQ96IW2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.3□□□□□ -1.72
SHDQ96IW2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHDQ96IW2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHDQ96IW2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SHDQ96IW2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.3□□□□□ -1.72
SHDQ96IW2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.3□□□□□ -1.72
SHDQ96IW2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
SHDQ96IW2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.3□□□□□ -1.72
SHDQ96IW2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SHDQ96IW2 MTND5P16-201ENST00000460269 1703 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.29□□□□□ -1.72
SHDQ96IW2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHDQ96IW2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHDQ96IW2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHDQ96IW2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.29□□□□□ -1.72
SHDQ96IW2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHDQ96IW2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHDQ96IW2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SHDQ96IW2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.29□□□□□ -1.72
SHDQ96IW2 AC007685.1-201ENST00000329806 452 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.29□□□□□ -1.72
SHDQ96IW2 RNU6-658P-201ENST00000384606 106 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 MIR888-201ENST00000401186 77 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 RNU2-37P-201ENST00000410695 177 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 RNU4-6P-201ENST00000410804 122 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 SNORA74C-2-201ENST00000411179 201 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 AL117339.3-201ENST00000418733 162 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 MTCYBP10-201ENST00000424905 650 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 AL159987.2-201ENST00000432754 307 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.29□□□□□ -1.72
SHDQ96IW2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.29□□□□□ -1.72
SHDQ96IW2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.29□□□□□ -1.72
SHDQ96IW2 RPL21P23-201ENST00000446654 460 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 AC133473.1-201ENST00000455173 299 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.29□□□□□ -1.72
SHDQ96IW2 Y_RNA.687-201ENST00000516558 91 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHDQ96IW2 HMGB1P14-201ENST00000557424 591 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 LINC00933-203ENST00000559812 219 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 AP001836.1-201ENST00000604675 523 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.29□□□□□ -1.72
SHDQ96IW2 MIR3976-201ENST00000606807 139 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.29□□□□□ -1.72
SHDQ96IW2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SHDQ96IW2 AL354798.1-201ENST00000622505 329 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.29□□□□□ -1.72
SHDQ96IW2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.29□□□□□ -1.72
SHDQ96IW2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHDQ96IW2 MTND4P1-201ENST00000457501 1466 ntBASIC4.29□□□□□ -1.72
SHDQ96IW2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHDQ96IW2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHDQ96IW2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHDQ96IW2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SHDQ96IW2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.28□□□□□ -1.72
SHDQ96IW2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHDQ96IW2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHDQ96IW2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHDQ96IW2 SRP72P2-201ENST00000344851 1979 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 RNA5SP119-201ENST00000362715 117 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 U8.8-201ENST00000365399 135 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 RNU6-72P-201ENST00000384285 79 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 MIR521-1-201ENST00000384902 87 ntBASIC4.28□□□□□ -1.72
SHDQ96IW2 MIR483-201ENST00000385070 76 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms