Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.43□□□□□ -1.7
DDX11Q96FC9 SNORA75B-201ENST00000384053 137 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 RNU6-821P-201ENST00000390995 107 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 AL391417.1-201ENST00000404100 426 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 HSPE1P8-201ENST00000406997 288 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 RNU4-78P-201ENST00000410940 126 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 AL035423.1-201ENST00000420331 213 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 AL590632.1-201ENST00000424289 371 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 AC087884.1-201ENST00000469738 328 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 AC010631.1-201ENST00000474150 156 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 RN7SL283P-201ENST00000489055 303 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 RNU6-1016P-201ENST00000516689 94 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 SCARNA14-201ENST00000516903 136 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.43□□□□□ -1.7
DDX11Q96FC9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.43□□□□□ -1.7
DDX11Q96FC9 AC010653.1-201ENST00000571108 881 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX11Q96FC9 AL137849.1-201ENST00000604767 169 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.43□□□□□ -1.7
DDX11Q96FC9 TUG1_2.1-201ENST00000614234 87 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 AC010378.1-201ENST00000619270 362 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 AC012314.7-201ENST00000619693 93 ntBASIC4.43□□□□□ -1.7
DDX11Q96FC9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDX11Q96FC9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX11Q96FC9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDX11Q96FC9 GABPAP-201ENST00000419271 1356 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.42□□□□□ -1.7
DDX11Q96FC9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDX11Q96FC9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
DDX11Q96FC9 RNU6-702P-201ENST00000364982 107 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 Y_RNA.399-201ENST00000383955 105 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 RNU6-890P-201ENST00000384121 107 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 SNORD3H-201ENST00000384486 214 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 Z98941.1-201ENST00000407764 100 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 MIR1302-3-201ENST00000408128 138 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 AC092809.3-201ENST00000415453 231 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 RPL7P37-201ENST00000425095 738 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 AL133162.1-201ENST00000463228 453 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 AC104472.2-201ENST00000469035 601 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 AC117503.1-201ENST00000472241 394 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 HMGB1P30-201ENST00000492455 606 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 AC078918.1-201ENST00000498515 228 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 UBE2CP3-201ENST00000502715 450 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 MTND4LP22-201ENST00000508209 276 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.42□□□□□ -1.7
DDX11Q96FC9 AP004242.1-201ENST00000533701 349 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 AL161670.1-201ENST00000554348 137 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 MIR5692C1-201ENST00000585309 91 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 SNRPGP15-201ENST00000600149 222 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 AC012669.1-201ENST00000603209 283 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX11Q96FC9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX11Q96FC9 AL162373.1-201ENST00000620433 407 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX11Q96FC9 AL732372.2-225ENST00000642124 456 ntBASIC4.42□□□□□ -1.7
DDX11Q96FC9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX11Q96FC9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDX11Q96FC9 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDX11Q96FC9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX11Q96FC9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
DDX11Q96FC9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
DDX11Q96FC9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.41□□□□□ -1.7
DDX11Q96FC9 RNU6-562P-201ENST00000362731 107 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 RNU1-18P-201ENST00000363062 164 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 RNU6-335P-201ENST00000364563 113 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 RNA5SP189-201ENST00000364920 115 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 RNU6-701P-201ENST00000384059 107 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 RNY1P14-201ENST00000384426 108 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 Y_RNA.527-201ENST00000384573 102 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 MIR135A2-201ENST00000384854 100 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 SNORD70.1-201ENST00000391007 85 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 AL669831.1-202ENST00000428504 417 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX11Q96FC9 AL162389.1-201ENST00000449233 177 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 RPL12P25-201ENST00000455592 494 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 snoU109.4-201ENST00000458953 143 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 AC008481.1-201ENST00000463278 396 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 RN7SL432P-201ENST00000484057 298 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 AC116337.1-201ENST00000509680 687 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 AC005921.1-201ENST00000510589 286 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 RNA5SP164-201ENST00000516533 110 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 RNU6-1069P-201ENST00000516612 133 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX11Q96FC9 RANP3-201ENST00000530970 276 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX11Q96FC9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX11Q96FC9 MTCO3P23-201ENST00000561363 289 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX11Q96FC9 AC009570.1-201ENST00000609599 745 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.41□□□□□ -1.7
DDX11Q96FC9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.41□□□□□ -1.7
DDX11Q96FC9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX11Q96FC9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
DDX11Q96FC9 AC073073.2-201ENST00000609827 2578 ntBASIC4.41□□□□□ -1.7
DDX11Q96FC9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
DDX11Q96FC9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.41□□□□□ -1.7
DDX11Q96FC9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX11Q96FC9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
DDX11Q96FC9 HSPA8P4-201ENST00000511877 1920 ntBASIC4.4□□□□□ -1.7
DDX11Q96FC9 AL137003.2-201ENST00000606924 2538 ntBASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms