Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RPL23AP70-201ENST00000483361 460 ntBASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 RPS15AP34-201ENST00000487776 387 ntBASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 RNU6-143P-201ENST00000516942 93 ntBASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 RN7SKP57-201ENST00000517248 293 ntBASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 OR5B19P-201ENST00000531766 928 ntBASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 GLYCAM1-201ENST00000546596 285 ntBASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 AC087883.1-201ENST00000551882 391 ntBASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 AC024619.4-201ENST00000580924 316 ntBASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 MIR4635-201ENST00000583759 79 ntBASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 AC011471.1-201ENST00000585766 187 ntBASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 AL589743.7-201ENST00000612637 233 ntBASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 AC008250.2-201ENST00000615261 205 ntBASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.08□□□□□ -2.08
RPUSD4Q96CM3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 RNY1P12-201ENST00000364251 105 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AL122016.1-201ENST00000403365 367 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 RNU2-39P-201ENST00000410604 198 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 RNU6-387P-201ENST00000411331 105 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AL353729.1-201ENST00000425044 720 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 MTND4P25-201ENST00000441039 533 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC128713.1-201ENST00000471495 306 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC004924.1-201ENST00000480160 781 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC107222.1-201ENST00000510899 637 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 RNA5SP341-201ENST00000516261 117 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 SNORA74D-201ENST00000516404 141 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC021739.1-201ENST00000559631 174 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 MIR1273C-201ENST00000578669 77 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 MIR1254-2-201ENST00000579553 63 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 CLIC4P2-201ENST00000601934 717 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AL391813.1-201ENST00000603098 260 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AC064872.1-201ENST00000604823 1072 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 MIR6798-201ENST00000612887 67 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AL359547.2-201ENST00000615810 418 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 ATP5A1P2-202ENST00000616464 443 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 Z69908.1-201ENST00000622603 247 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 Z99571.1-201ENST00000636677 394 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 CDC27P3-201ENST00000635418 1910 ntBASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RPUSD4Q96CM3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 RNU6-288P-201ENST00000363690 104 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 RNU6-108P-201ENST00000365558 107 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 SET-203ENST00000372688 801 ntTSL 2 BASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 SNORA40C-201ENST00000391285 128 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 RN7SKP27-201ENST00000410684 333 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 RPL35AP12-201ENST00000425362 338 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AC093106.2-201ENST00000428212 385 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 RPL23AP30-201ENST00000432419 501 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 MTCO3P5-201ENST00000433620 714 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AL031667.1-201ENST00000440222 725 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 OSTCP8-201ENST00000445117 448 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 AC079781.2-201ENST00000446424 169 ntBASIC2.06□□□□□ -2.08
RPUSD4Q96CM3 Z83846.1-201ENST00000446798 265 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms