Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 SNORD105B-201ENST00000458770 79 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 RPL30P14-201ENST00000482744 348 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.82□□□□□ -1.8
HPS3Q969F9 CCDC34P1-201ENST00000507441 517 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.82□□□□□ -1.8
HPS3Q969F9 AC006445.2-201ENST00000510061 472 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.82□□□□□ -1.8
HPS3Q969F9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HPS3Q969F9 AC023050.3-201ENST00000541142 333 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.82□□□□□ -1.8
HPS3Q969F9 AC011602.1-201ENST00000546484 331 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.82□□□□□ -1.8
HPS3Q969F9 OR11H5P-201ENST00000554039 926 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.82□□□□□ -1.8
HPS3Q969F9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.82□□□□□ -1.8
HPS3Q969F9 AL161756.2-201ENST00000604597 246 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 AC008962.1-201ENST00000605729 304 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 AC092794.2-201ENST00000620933 563 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 AC022418.1-201ENST00000624118 445 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 AC090617.10-201ENST00000624308 134 ntBASIC3.82□□□□□ -1.8
HPS3Q969F9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.82□□□□□ -1.8
HPS3Q969F9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HPS3Q969F9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
HPS3Q969F9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HPS3Q969F9 Y_RNA.378-201ENST00000365652 113 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 MIR34B-201ENST00000385076 84 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 SNORA16.2-201ENST00000390991 127 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.81□□□□□ -1.8
HPS3Q969F9 POLHP1-201ENST00000411806 470 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 Z99755.1-201ENST00000414048 380 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 BX682237.1-201ENST00000415016 335 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.81□□□□□ -1.8
HPS3Q969F9 AL669831.1-202ENST00000428504 417 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 GTF2IP13-201ENST00000438487 386 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 PRPS1P1-201ENST00000445305 876 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 RNU7-167P-201ENST00000459160 62 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.81□□□□□ -1.8
HPS3Q969F9 AP000852.1-201ENST00000472460 573 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 HMGB1P30-201ENST00000492455 606 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 MTCO2P30-201ENST00000503662 364 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 HIGD1AP13-201ENST00000509878 289 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 AC008716.1-201ENST00000511084 513 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.81□□□□□ -1.8
HPS3Q969F9 RNU2-69P-201ENST00000516061 100 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 RNU6-189P-201ENST00000516120 101 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 Y_RNA.702-201ENST00000516843 96 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 AC007458.1-201ENST00000542812 373 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.81□□□□□ -1.8
HPS3Q969F9 MIR4425-201ENST00000580572 84 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 MIR3609-201ENST00000582661 80 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 AC092747.3-201ENST00000603769 301 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 AC007179.3-201ENST00000604976 235 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 FTX_3.1-201ENST00000610451 147 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 DUSP12P1-201ENST00000612874 516 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.81□□□□□ -1.8
HPS3Q969F9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.81□□□□□ -1.8
HPS3Q969F9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.81□□□□□ -1.8
HPS3Q969F9 AL079305.1-201ENST00000623159 3008 ntBASIC3.81□□□□□ -1.8
HPS3Q969F9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.81□□□□□ -1.8
HPS3Q969F9 PWAR6-201ENST00000552334 4618 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 AC032011.1-201ENST00000611703 1549 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 MAPK10-362ENST00000641864 4484 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HPS3Q969F9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
HPS3Q969F9 MTND4P35-201ENST00000604257 1375 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HPS3Q969F9 CBX3P1-201ENST00000325243 554 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HPS3Q969F9 FTLP6-201ENST00000355274 422 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 Y_RNA.279-201ENST00000364763 95 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 AP002088.1-201ENST00000382740 395 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 RNU6-1035P-201ENST00000384477 107 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 RNU6-1179P-201ENST00000384667 107 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 MIR578-201ENST00000384828 96 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 MIR490-201ENST00000384865 128 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 RNA5SP219-201ENST00000390940 113 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 RNU6-510P-201ENST00000391239 108 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 BX323014.1-201ENST00000412876 237 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 RPL7P10-201ENST00000417407 739 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.8□□□□□ -1.8
HPS3Q969F9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.8□□□□□ -1.8
HPS3Q969F9 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.8□□□□□ -1.8
HPS3Q969F9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HPS3Q969F9 NEK4P1-201ENST00000433383 879 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.8□□□□□ -1.8
HPS3Q969F9 RPL21P23-201ENST00000446654 460 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 RPL7P12-201ENST00000446719 750 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 PMCHL2-203ENST00000457791 237 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 RPS4XP2-201ENST00000458402 793 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 RPL32P34-201ENST00000486380 400 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 IGKV2-26-201ENST00000518305 343 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.8□□□□□ -1.8
HPS3Q969F9 RPL7P20-201ENST00000520308 745 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.8□□□□□ -1.8
HPS3Q969F9 PSMA3P-201ENST00000555485 635 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 AL118558.2-201ENST00000556294 238 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.8□□□□□ -1.8
HPS3Q969F9 AC012119.1-201ENST00000603184 222 ntBASIC3.8□□□□□ -1.8
HPS3Q969F9 AL355073.2-201ENST00000612106 557 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms