Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.57□□□□□ -2
PTP4A1Q93096 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.57□□□□□ -2
PTP4A1Q93096 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.57□□□□□ -2
PTP4A1Q93096 AC009812.2-201ENST00000517657 457 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.57□□□□□ -2
PTP4A1Q93096 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 AC012213.3-201ENST00000577199 777 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 HMGN1P30-201ENST00000589286 268 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 WISP1-OT1-201ENST00000602893 642 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 AL022154.1-201ENST00000604698 785 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 AL360219.1-201ENST00000610230 366 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 AC087683.2-201ENST00000611384 326 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 AC091304.6-201ENST00000619761 202 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.57□□□□□ -2
PTP4A1Q93096 AC138627.2-201ENST00000624202 601 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.57□□□□□ -2
PTP4A1Q93096 Z82209.1-201ENST00000422141 2135 ntBASIC2.57□□□□□ -2
PTP4A1Q93096 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PTP4A1Q93096 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.57□□□□□ -2
PTP4A1Q93096 AC092593.1-201ENST00000515413 1815 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.56□□□□□ -2
PTP4A1Q93096 OR56A5-201ENST00000340110 738 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 RNU5E-1-201ENST00000362477 120 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 RNU4-1-201ENST00000363925 141 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 RNA5SP240-201ENST00000365355 128 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 RNU1-52P-201ENST00000384190 164 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 RNU6-851P-201ENST00000384565 107 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 MIR34A-201ENST00000385130 110 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 RNU6-387P-201ENST00000411331 105 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 AC003685.2-201ENST00000422795 395 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 EIF4EP4-201ENST00000424916 578 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 RPS3AP12-201ENST00000443616 753 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 AL136380.1-201ENST00000447970 162 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.56□□□□□ -2
PTP4A1Q93096 AC108078.2-201ENST00000510750 236 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 RNU5B-3P-201ENST00000516601 115 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 SNORA70.24-201ENST00000517233 118 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.56□□□□□ -2
PTP4A1Q93096 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.56□□□□□ -2
PTP4A1Q93096 MTATP6P24-201ENST00000576835 677 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 MIR4446-201ENST00000578505 67 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PTP4A1Q93096 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.56□□□□□ -2
PTP4A1Q93096 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 AL603755.1-201ENST00000619504 163 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 MIR5739-201ENST00000619803 80 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 AC024581.2-201ENST00000619986 252 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.56□□□□□ -2
PTP4A1Q93096 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PTP4A1Q93096 AC010297.1-201ENST00000623948 149 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 AC092656.1-203ENST00000624134 423 ntBASIC2.56□□□□□ -2
PTP4A1Q93096 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.56□□□□□ -2
PTP4A1Q93096 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
PTP4A1Q93096 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.56□□□□□ -2
PTP4A1Q93096 RNU1-100P-201ENST00000365255 165 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 SNORA9.2-201ENST00000365361 133 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 SNORA70.4-201ENST00000365509 134 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 SNORA20.2-201ENST00000383922 131 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.55□□□□□ -2
PTP4A1Q93096 AL627311.1-201ENST00000431514 115 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 RPL7P34-201ENST00000433316 712 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 AL353706.1-201ENST00000436728 494 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.55□□□□□ -2
PTP4A1Q93096 AC006026.2-201ENST00000457376 180 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 CYP2C59P-201ENST00000457790 269 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 AC133134.1-201ENST00000466800 359 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 AC109486.1-201ENST00000486833 374 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 MTAPP1-201ENST00000489154 819 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.55□□□□□ -2
PTP4A1Q93096 AC026427.2-201ENST00000506228 536 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 RPL37P25-201ENST00000507308 276 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.55□□□□□ -2
PTP4A1Q93096 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.55□□□□□ -2
PTP4A1Q93096 OR5B19P-201ENST00000531766 928 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 AC027176.1-201ENST00000560204 514 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 AL049779.4-201ENST00000604500 156 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 AL451064.1-201ENST00000607718 471 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 AC005046.1-201ENST00000608515 625 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 AC012409.4-201ENST00000612923 249 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 AC009159.2-201ENST00000617603 606 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 MIR203B-201ENST00000636080 86 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.55□□□□□ -2
PTP4A1Q93096 AC103710.2-202ENST00000641454 2853 ntBASIC2.55□□□□□ -2
PTP4A1Q93096 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
PTP4A1Q93096 RNU1-138P-201ENST00000384093 164 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 MIR518D-201ENST00000385014 87 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 RNU4-72P-201ENST00000410754 173 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 Y_RNA.623-201ENST00000411128 95 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 NPM1P11-201ENST00000417106 855 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 AL365338.1-201ENST00000422282 858 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 AC007283.2-201ENST00000424739 197 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 RPL35AP12-201ENST00000425362 338 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.54□□□□□ -2
PTP4A1Q93096 MYL8P-204ENST00000431574 518 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 TAF9P1-201ENST00000445421 515 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.54□□□□□ -2
PTP4A1Q93096 TAF9P2-201ENST00000454958 515 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 snoU109.1-201ENST00000459339 135 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 AC117503.1-201ENST00000472241 394 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms