Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.27□□□□□ -1.73
RTF1Q92541 PRPS1P1-201ENST00000445305 876 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 FABP5P13-201ENST00000452144 328 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 AC233279.1-201ENST00000455300 423 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 SCARNA18-201ENST00000459004 134 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 RNU7-66P-201ENST00000459469 62 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 RPL23AP62-201ENST00000463396 453 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 AC004801.2-202ENST00000463559 283 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.27□□□□□ -1.73
RTF1Q92541 MTCO1P29-201ENST00000496868 288 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.27□□□□□ -1.73
RTF1Q92541 KLHL2P1-201ENST00000508691 521 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.27□□□□□ -1.73
RTF1Q92541 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.27□□□□□ -1.73
RTF1Q92541 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.27□□□□□ -1.73
RTF1Q92541 GMPSP1-201ENST00000514075 579 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 RNU6-864P-201ENST00000516256 108 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 RNU6-1038P-201ENST00000516516 104 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 SNORA31.20-201ENST00000517111 133 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.27□□□□□ -1.73
RTF1Q92541 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.27□□□□□ -1.73
RTF1Q92541 OR11H5P-201ENST00000554039 926 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 TGIF1P1-201ENST00000558095 802 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.27□□□□□ -1.73
RTF1Q92541 SNRPGP15-201ENST00000600149 222 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 AL160281.1-201ENST00000605307 311 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 AC007619.2-201ENST00000605743 379 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 RNVU1-4-201ENST00000612985 164 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.27□□□□□ -1.73
RTF1Q92541 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RTF1Q92541 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RTF1Q92541 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RTF1Q92541 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RTF1Q92541 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTF1Q92541 AP001350.1-201ENST00000601906 1524 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
RTF1Q92541 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.26□□□□□ -1.73
RTF1Q92541 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
RTF1Q92541 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTF1Q92541 USP8P1-201ENST00000494673 3183 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 RNA5SP374-201ENST00000362939 125 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 RNU6-173P-201ENST00000364215 104 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTF1Q92541 Y_RNA.474-201ENST00000384341 102 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 SAR1AP4-201ENST00000429225 591 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.26□□□□□ -1.73
RTF1Q92541 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.26□□□□□ -1.73
RTF1Q92541 RNU6-953P-201ENST00000459154 107 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.26□□□□□ -1.73
RTF1Q92541 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.26□□□□□ -1.73
RTF1Q92541 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.26□□□□□ -1.73
RTF1Q92541 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.26□□□□□ -1.73
RTF1Q92541 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.26□□□□□ -1.73
RTF1Q92541 Y_RNA.701-201ENST00000516812 110 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 AC004024.1-201ENST00000549244 247 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.26□□□□□ -1.73
RTF1Q92541 RPL23AP84-201ENST00000571193 464 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.26□□□□□ -1.73
RTF1Q92541 AC113139.1-201ENST00000605049 239 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 AC016727.1-205ENST00000605437 569 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 AC005000.2-201ENST00000605468 310 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 AC009570.1-201ENST00000609599 745 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTF1Q92541 MTND5P42-201ENST00000637720 498 ntBASIC4.26□□□□□ -1.73
RTF1Q92541 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.26□□□□□ -1.73
RTF1Q92541 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.26□□□□□ -1.73
RTF1Q92541 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.26□□□□□ -1.73
RTF1Q92541 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RTF1Q92541 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RTF1Q92541 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTF1Q92541 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RTF1Q92541 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTF1Q92541 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTF1Q92541 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RTF1Q92541 SNORD113-7-201ENST00000363762 77 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 Y_RNA.301-201ENST00000364990 103 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 Y_RNA.431-201ENST00000384086 102 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 POLHP1-201ENST00000411806 470 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.25□□□□□ -1.73
RTF1Q92541 RPL7P10-201ENST00000417407 739 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.25□□□□□ -1.73
RTF1Q92541 AL591704.1-201ENST00000432574 275 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.25□□□□□ -1.73
RTF1Q92541 NDUFA5P4-201ENST00000436704 385 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RTF1Q92541 AC104058.1-201ENST00000448028 297 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 RPS15AP27-201ENST00000449183 343 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.25□□□□□ -1.73
RTF1Q92541 HSPE1P6-201ENST00000479457 291 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 AC083904.1-201ENST00000487828 231 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 TRBVA-201ENST00000498804 316 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.25□□□□□ -1.73
RTF1Q92541 HMGB1P22-201ENST00000505315 124 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.25□□□□□ -1.73
RTF1Q92541 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.25□□□□□ -1.73
RTF1Q92541 Y_RNA.689-201ENST00000516589 107 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 AP001804.3-201ENST00000525146 880 ntBASIC4.25□□□□□ -1.73
RTF1Q92541 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.25□□□□□ -1.73
RTF1Q92541 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms