Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RPS15AP27-201ENST00000449183 343 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 RPL12P25-201ENST00000455592 494 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 AC091885.1-201ENST00000506658 268 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 PRDX4P1-201ENST00000507189 574 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 LRRC34P2-201ENST00000514850 553 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 RNA5SP341-201ENST00000516261 117 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 MIR548AC-201ENST00000585049 88 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 DUSP12P1-201ENST00000612874 516 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 AC099506.2-201ENST00000623074 221 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 AL021368.2-201ENST00000606125 5352 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 RPS4XP5-202ENST00000449995 1334 ntBASIC3.39□□□□□ -1.87
HMGB4Q8WW32 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGB4Q8WW32 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 Y_RNA.33-201ENST00000362591 102 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 RNU6-395P-201ENST00000365662 106 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 FGF7P8-201ENST00000402994 292 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AL592114.1-201ENST00000403842 483 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 RNA5SP38-201ENST00000410750 119 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 RPL30P16-201ENST00000419341 429 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AC006989.1-201ENST00000427212 131 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AL360271.2-201ENST00000447710 161 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 RPL21P99-201ENST00000480369 423 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AC139453.3-201ENST00000493276 369 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AC104136.1-201ENST00000512969 394 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AC009902.1-201ENST00000519351 183 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AC060780.3-201ENST00000589464 80 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AL451007.1-201ENST00000595491 289 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 RNU6-89P-201ENST00000606519 100 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AL138880.2-201ENST00000616214 239 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AC006386.2-201ENST00000624491 75 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 AC012005.1-201ENST00000624575 75 ntBASIC3.38□□□□□ -1.87
HMGB4Q8WW32 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGB4Q8WW32 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
HMGB4Q8WW32 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGB4Q8WW32 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMGB4Q8WW32 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 Y_RNA.390-201ENST00000383932 102 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 SNORA75B-201ENST00000384053 137 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 MIR578-201ENST00000384828 96 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HMGB4Q8WW32 SNORA16.2-201ENST00000390991 127 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 SNORD70.1-201ENST00000391007 85 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 RNU6-373P-201ENST00000411247 98 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 Z99755.1-201ENST00000414048 380 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGB4Q8WW32 MYL8P-204ENST00000431574 518 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 SETP5-201ENST00000437270 562 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGB4Q8WW32 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.37□□□□□ -1.87
HMGB4Q8WW32 AC022493.1-201ENST00000492984 337 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 MTCYBP18-201ENST00000501056 747 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 AF235103.2-201ENST00000525753 346 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGB4Q8WW32 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGB4Q8WW32 AC078814.3-201ENST00000553036 491 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 AL118558.2-201ENST00000556294 238 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGB4Q8WW32 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.37□□□□□ -1.87
HMGB4Q8WW32 MTCO3P23-201ENST00000561363 289 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 AC007938.3-201ENST00000604965 623 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 AC110741.2-201ENST00000605278 268 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 U2.21-201ENST00000637295 81 ntBASIC3.37□□□□□ -1.87
HMGB4Q8WW32 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMGB4Q8WW32 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGB4Q8WW32 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGB4Q8WW32 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 AL356274.2-201ENST00000624379 3752 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 RNU6-393P-201ENST00000384475 107 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 RNU6-1025P-201ENST00000410629 104 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 RPL21P90-201ENST00000415692 466 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 AL139413.1-201ENST00000421309 217 ntBASIC3.36□□□□□ -1.87
HMGB4Q8WW32 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.36□□□□□ -1.87
HMGB4Q8WW32 ERLEC1P1-201ENST00000433806 578 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms