Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 snoU13.26-201ENST00000459452 105 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AP001324.2-201ENST00000461163 319 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 CBX3P7-201ENST00000532876 502 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 ROCK1P1-201ENST00000573767 549 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 NRBF2P1-201ENST00000587407 859 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AC007229.1-201ENST00000590455 412 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AL138963.2-201ENST00000605137 226 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 AL354685.2-201ENST00000448218 1447 ntBASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ZIC4Q8N9L1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 RNU6-512P-201ENST00000364438 103 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 SNORA16B-201ENST00000364674 135 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 RNU6-748P-201ENST00000384648 107 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 MIR17-201ENST00000385012 84 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 CIR1P3-201ENST00000405137 479 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 MIR1289-2-201ENST00000408360 111 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 RNA5SP489-201ENST00000410986 109 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AL359704.1-201ENST00000411586 781 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 RPS25P9-201ENST00000435591 252 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AC104629.1-201ENST00000494226 508 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 CKS1BP2-201ENST00000497342 240 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 YWHAEP4-201ENST00000505390 198 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 RNU2-44P-201ENST00000516795 194 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AP001269.3-201ENST00000588718 329 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 BNIP3P27-201ENST00000599991 412 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AC073544.2-201ENST00000601155 540 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AC068790.3-201ENST00000602988 553 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AF129408.1-201ENST00000608767 431 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AP001486.3-201ENST00000615334 372 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 AL109620.1-201ENST00000618738 1197 ntBASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.62□□□□□ -2.15
ZIC4Q8N9L1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 RNA5SP240-201ENST00000365355 128 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 MIR19A-201ENST00000384878 82 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 MIR1294-201ENST00000408503 142 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 RN7SKP266-201ENST00000410232 287 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 RNU6-1140P-201ENST00000410517 106 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 RPL7P54-201ENST00000438336 674 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AC005094.1-201ENST00000440420 368 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 USP9YP15-201ENST00000442391 422 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 RPL7P12-201ENST00000446719 750 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 MTCO1P27-201ENST00000448269 226 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AC055731.1-201ENST00000474387 401 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 SNORA19.3-201ENST00000516165 130 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 SNORA31.25-201ENST00000517242 134 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 MIR3126-201ENST00000577443 74 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AL596327.1-201ENST00000603629 213 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 MIR5739-201ENST00000619803 80 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 AC013437.2-201ENST00000639587 677 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 Z75746.1-201ENST00000440243 2080 ntBASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
ZIC4Q8N9L1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 RNU6-462P-201ENST00000362659 105 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 MIR583-201ENST00000384846 75 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AL139397.2-201ENST00000404529 772 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AL356379.1-201ENST00000414105 126 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 AC097463.2-201ENST00000421074 142 ntBASIC1.6□□□□□ -2.15
ZIC4Q8N9L1 HMGN2P19-201ENST00000425149 265 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms