Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 Y_RNA.512-201ENST00000384518 102 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-907P-201ENST00000390924 102 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-823P-201ENST00000391042 103 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-101P-201ENST00000410323 104 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-174P-201ENST00000410406 106 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 HSPE1P12-201ENST00000412576 301 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 Z85995.1-201ENST00000415547 335 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 RPS24P6-201ENST00000452670 400 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 HMGN2P13-201ENST00000476476 274 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 AC026402.1-201ENST00000513642 170 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 SCARNA15.2-201ENST00000516409 127 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 AF186190.1-201ENST00000517470 480 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 AC004024.1-201ENST00000549244 247 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 AL355810.1-201ENST00000614629 552 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 RMST_4.1-201ENST00000616886 107 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 AL606534.2-204ENST00000635008 178 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 RLIMP1-201ENST00000339626 1680 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 DDX18P3-201ENST00000404856 2007 ntBASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
TRIM48Q8IWZ4 MAPK10-253ENST00000641010 4072 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 ZNF962P-201ENST00000443465 3140 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 MIR372-201ENST00000362225 67 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 Y_RNA.39-201ENST00000362620 98 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 SNORD35B-201ENST00000363660 87 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 Y_RNA.245-201ENST00000364493 95 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 RNA5SP515-201ENST00000364570 118 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-702P-201ENST00000364982 107 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 Y_RNA.424-201ENST00000384063 103 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 RPL27AP8-201ENST00000424277 446 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 RPL7P2-201ENST00000427639 268 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 AC099799.1-201ENST00000439809 192 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 AC006011.1-201ENST00000442758 349 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 CHEK2P4-201ENST00000450340 246 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 CECR9-201ENST00000453421 199 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 snoU13.4-201ENST00000458916 104 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 RPL17P19-201ENST00000489069 552 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 AC139453.3-201ENST00000493276 369 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 HMGN1P11-201ENST00000508668 303 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 AL359273.1-201ENST00000510918 627 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 AC090281.1-201ENST00000523019 276 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 SUB1P3-201ENST00000564581 315 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 AC025627.2-201ENST00000576220 160 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 MIR4286-201ENST00000580651 93 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 MIR3668-201ENST00000582138 75 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 AC124312.5-201ENST00000604451 268 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 RNA5SP196-201ENST00000625967 102 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 AL356489.2-201ENST00000566968 3528 ntBASIC4.01□□□□□ -1.77
TRIM48Q8IWZ4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM48Q8IWZ4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM48Q8IWZ4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM48Q8IWZ4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM48Q8IWZ4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-1317P-201ENST00000364582 104 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 RNU6-1318P-201ENST00000365389 103 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 RNA5SP283-201ENST00000365604 119 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 CYP4F29P-201ENST00000420685 446 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4□□□□□ -1.77
TRIM48Q8IWZ4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM48Q8IWZ4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM48Q8IWZ4 CBX3P6-201ENST00000430257 527 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4□□□□□ -1.77
TRIM48Q8IWZ4 FABP5P15-201ENST00000453566 214 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM48Q8IWZ4 AL583843.1-201ENST00000456070 346 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4□□□□□ -1.77
TRIM48Q8IWZ4 AL160314.1-201ENST00000490836 438 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 AC114801.2-201ENST00000503825 781 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 ACA59.1-201ENST00000515966 143 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 RNA5SP290-201ENST00000517133 127 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 AC025755.1-201ENST00000521306 278 ntBASIC4□□□□□ -1.77
TRIM48Q8IWZ4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms