Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AP005902.1-201ENST00000521358 186 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 AL121821.2-201ENST00000556081 394 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 MIR3167-201ENST00000579623 85 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 MIR5002-201ENST00000584713 97 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 AP001981.2-201ENST00000603241 418 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 AC091152.3-201ENST00000604227 325 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 AC011939.3-201ENST00000613686 466 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 uc_338.12-201ENST00000616344 181 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 AL589994.2-201ENST00000621124 579 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 AC068787.1-201ENST00000623908 691 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 AC092192.1-201ENST00000633154 1018 ntBASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
NUDCD3Q8IVD9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
NUDCD3Q8IVD9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
NUDCD3Q8IVD9 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 RNY4P16-201ENST00000364768 94 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 MIR218-1-201ENST00000384999 110 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 MIR221-201ENST00000385135 110 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 RPL23AP39-201ENST00000415533 405 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 RPS27AP14-201ENST00000422868 454 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AL353777.1-201ENST00000425552 326 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC093106.2-201ENST00000428212 385 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 RPL37P21-201ENST00000435890 276 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AL591719.1-201ENST00000444669 744 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 RPL23AP7-203ENST00000449021 469 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC108938.1-201ENST00000451204 136 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AL021397.1-201ENST00000451806 248 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC025033.1-201ENST00000463883 194 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AL049873.1-201ENST00000480540 376 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 RPL39P36-201ENST00000490784 156 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 SNORD19.2-201ENST00000516978 73 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 RNU6-201P-201ENST00000517100 61 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC107934.1-201ENST00000522215 217 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AP001372.4-201ENST00000524889 472 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AP003461.1-201ENST00000528866 78 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC009097.3-201ENST00000563557 1018 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AP002791.1-201ENST00000623291 381 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC093591.3-201ENST00000634516 308 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC007671.2-201ENST00000637344 619 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 AC104454.1-201ENST00000421341 1401 ntBASIC2.15□□□□□ -2.07
NUDCD3Q8IVD9 RNU6-511P-201ENST00000363496 107 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 SMIM11P1-201ENST00000369586 178 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 SNORA48.3-201ENST00000391081 134 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 RNU6-817P-201ENST00000391083 104 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 RPS4XP8-201ENST00000402039 771 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 FCF1P10-201ENST00000407590 479 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 RNU2-62P-201ENST00000410868 191 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 HMGB3P2-201ENST00000411913 584 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 RPS12P24-201ENST00000412619 387 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 NPM1P11-201ENST00000417106 855 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AC236972.1-201ENST00000433225 199 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 EEF1B2P7-201ENST00000451177 676 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 MTND2P14-201ENST00000482139 351 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 MTND1P3-201ENST00000484956 952 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 RNU6-1183P-201ENST00000517054 60 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AC022616.6-201ENST00000520479 119 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 ELOCP32-201ENST00000548625 324 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AC027176.1-201ENST00000560204 514 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 ROCK1P1-201ENST00000573767 549 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 MIR5571-201ENST00000577998 113 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AL670379.6-201ENST00000603753 252 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AL670379.11-201ENST00000604059 253 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AC008162.1-201ENST00000604718 254 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AL670379.1-201ENST00000604752 252 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AL670379.5-201ENST00000605253 252 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AL670379.12-201ENST00000605291 253 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AL670379.8-201ENST00000605353 252 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AL021997.1-201ENST00000605757 193 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AL670379.7-201ENST00000605823 252 ntBASIC2.14□□□□□ -2.07
NUDCD3Q8IVD9 AP000240.1-201ENST00000609910 452 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms