Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 AC106782.4-201ENST00000568264 210 ntBASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 MIR5583-1-201ENST00000580941 59 ntBASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 AC005498.1-201ENST00000592125 465 ntBASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 BNIP3P25-201ENST00000596023 559 ntBASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 AL365204.3-201ENST00000612448 685 ntBASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 AC012409.4-201ENST00000612923 249 ntBASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 AL162274.2-201ENST00000614406 332 ntBASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 AL589994.2-201ENST00000621124 579 ntBASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.99□□□□□ -1.77
UBE3BQ7Z3V4 AC009812.4-201ENST00000569134 1805 ntBASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 Y_RNA.378-201ENST00000365652 113 ntBASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 SAR1AP4-201ENST00000429225 591 ntBASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 AC020550.1-201ENST00000447385 163 ntBASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 RBBP4P6-201ENST00000508098 202 ntBASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 RANP3-201ENST00000530970 276 ntBASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 OR5D17P-201ENST00000531492 978 ntBASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 AC026464.5-201ENST00000562497 722 ntBASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 SNRPGP15-201ENST00000600149 222 ntBASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 AC113139.1-201ENST00000605049 239 ntBASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.98□□□□□ -1.77
UBE3BQ7Z3V4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 Y_RNA.301-201ENST00000364990 103 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 Y_RNA.373-201ENST00000365600 103 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 AP002088.1-201ENST00000382740 395 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 Y_RNA.414-201ENST00000384011 101 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 MTATP6P4-201ENST00000427725 675 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 HMGB3P11-201ENST00000440127 604 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 PRPS1P1-201ENST00000445305 876 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 AC007677.1-201ENST00000445757 515 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 S100A11P2-201ENST00000467589 312 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 RPL23AP14-201ENST00000468281 468 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 RPL27AP5-201ENST00000469428 449 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 SNORA31.3-201ENST00000516029 96 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 RNU6-864P-201ENST00000516256 108 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 RN7SKP258-201ENST00000517151 304 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 AP001804.3-201ENST00000525146 880 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 OR11H5P-201ENST00000554039 926 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 AC104237.2-201ENST00000612456 443 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 SDR42E1P2-201ENST00000614861 481 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 ATP5A1P2-202ENST00000616464 443 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 AL160413.1-201ENST00000622780 310 ntBASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBE3BQ7Z3V4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 MIR422A-201ENST00000362286 90 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-1127P-201ENST00000384580 107 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-14P-201ENST00000384630 106 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 AL356057.2-201ENST00000403318 432 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 RNU2-37P-201ENST00000410695 177 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-55P-201ENST00000411092 107 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-954P-201ENST00000411355 107 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 RPL26P6-201ENST00000440913 438 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 HMGB3P8-201ENST00000449709 577 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 PPP1R2P5-201ENST00000457256 603 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 GMPSP1-201ENST00000514075 579 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 AC008885.1-201ENST00000514930 301 ntBASIC3.96□□□□□ -1.78
UBE3BQ7Z3V4 RNU6-390P-201ENST00000516259 103 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms