Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AL133162.1-201ENST00000463228 453 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 HSPD1P15-201ENST00000505573 1122 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.16□□□□□ -1.9
USP43Q70EL4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
USP43Q70EL4 AC107222.1-201ENST00000510899 637 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.16□□□□□ -1.9
USP43Q70EL4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.16□□□□□ -1.9
USP43Q70EL4 AC026801.2-201ENST00000515352 425 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 SNORD27.1-201ENST00000516319 72 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 RNU6-410P-201ENST00000517006 107 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 RN7SKP40-201ENST00000517211 242 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 AP005902.1-201ENST00000521358 186 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 OR4R1P-201ENST00000529879 463 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 AP000907.2-201ENST00000530827 353 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.16□□□□□ -1.9
USP43Q70EL4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.16□□□□□ -1.9
USP43Q70EL4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.16□□□□□ -1.9
USP43Q70EL4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.16□□□□□ -1.9
USP43Q70EL4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.16□□□□□ -1.9
USP43Q70EL4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.16□□□□□ -1.9
USP43Q70EL4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.16□□□□□ -1.9
USP43Q70EL4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.16□□□□□ -1.9
USP43Q70EL4 AC098848.2-201ENST00000588023 330 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 AC073539.2-201ENST00000597113 165 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 APOOP1-201ENST00000604695 592 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 AC012468.1-201ENST00000604888 430 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 RNU6-89P-201ENST00000606519 100 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 FAM157A-202ENST00000615155 405 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 uc_338.12-201ENST00000616344 181 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 AL354950.2-201ENST00000617939 290 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 AC009318.4-201ENST00000620496 486 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.16□□□□□ -1.9
USP43Q70EL4 U2.22-201ENST00000636441 106 ntBASIC3.16□□□□□ -1.9
USP43Q70EL4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP43Q70EL4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
USP43Q70EL4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
USP43Q70EL4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.91
USP43Q70EL4 NACAP2-201ENST00000318548 624 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 Y_RNA.5-201ENST00000362334 102 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 RNU6-600P-201ENST00000362524 99 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 RNA5SP258-201ENST00000362750 119 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 DEFB109C-201ENST00000382575 264 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 DEFB109B-201ENST00000382656 264 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 Y_RNA.557-201ENST00000384680 107 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 MIR1250-201ENST00000408098 113 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.15□□□□□ -1.91
USP43Q70EL4 RPS15AP12-201ENST00000419498 388 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 AC012065.2-201ENST00000421295 375 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.15□□□□□ -1.91
USP43Q70EL4 HMGN2P31-201ENST00000432430 273 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.15□□□□□ -1.91
USP43Q70EL4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.15□□□□□ -1.91
USP43Q70EL4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.15□□□□□ -1.91
USP43Q70EL4 DDX3P2-201ENST00000446138 111 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 AC073415.1-201ENST00000449240 153 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 RPS4XP10-201ENST00000465034 731 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 RN7SL594P-201ENST00000470590 287 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 AL163973.1-201ENST00000484753 577 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 AC093767.1-201ENST00000504523 156 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 FAM206BP-201ENST00000510179 541 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.15□□□□□ -1.91
USP43Q70EL4 SCARNA13-201ENST00000516672 275 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 RNU6-988P-201ENST00000519081 107 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.15□□□□□ -1.91
USP43Q70EL4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.15□□□□□ -1.91
USP43Q70EL4 AP003497.1-201ENST00000528472 562 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
USP43Q70EL4 OR5B10P-201ENST00000532869 642 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.15□□□□□ -1.91
USP43Q70EL4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.15□□□□□ -1.91
USP43Q70EL4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.15□□□□□ -1.91
USP43Q70EL4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.15□□□□□ -1.91
USP43Q70EL4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.15□□□□□ -1.91
USP43Q70EL4 AC105224.1-201ENST00000587055 421 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 AC078899.3-201ENST00000599065 212 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 AC005014.2-201ENST00000607795 599 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 AC006023.2-201ENST00000609916 167 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 Z69720.2-201ENST00000624755 279 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.15□□□□□ -1.91
USP43Q70EL4 AC073476.4-201ENST00000628409 72 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 AC009902.3-201ENST00000606235 2172 ntBASIC3.15□□□□□ -1.91
USP43Q70EL4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
USP43Q70EL4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
USP43Q70EL4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
USP43Q70EL4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
USP43Q70EL4 AC011460.1-201ENST00000636268 1834 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
USP43Q70EL4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.14□□□□□ -1.91
USP43Q70EL4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
USP43Q70EL4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.14□□□□□ -1.91
USP43Q70EL4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP43Q70EL4 Y_RNA.22-201ENST00000362492 102 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 RNU5E-8P-201ENST00000363502 116 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 Y_RNA.158-201ENST00000363651 101 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 RNU6-522P-201ENST00000364497 107 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 U3.12-201ENST00000364498 214 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 RNU6-996P-201ENST00000365438 107 ntBASIC3.14□□□□□ -1.91
USP43Q70EL4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP43Q70EL4 SET-203ENST00000372688 801 ntTSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms