Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AP000776.1-201ENST00000530032 1663 ntBASIC0.71□□□□□ -2.3
UBR3Q6ZT12 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.71□□□□□ -2.3
UBR3Q6ZT12 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.71□□□□□ -2.3
UBR3Q6ZT12 RNU6-420P-201ENST00000458780 107 ntBASIC0.71□□□□□ -2.3
UBR3Q6ZT12 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.71□□□□□ -2.3
UBR3Q6ZT12 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.71□□□□□ -2.3
UBR3Q6ZT12 ZNF92P3-201ENST00000596594 954 ntBASIC0.71□□□□□ -2.3
UBR3Q6ZT12 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
UBR3Q6ZT12 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
UBR3Q6ZT12 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
UBR3Q6ZT12 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.71□□□□□ -2.3
UBR3Q6ZT12 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.71□□□□□ -2.3
UBR3Q6ZT12 RPL39P28-201ENST00000465655 155 ntBASIC0.71□□□□□ -2.3
UBR3Q6ZT12 RNF138P1-201ENST00000502765 546 ntBASIC0.71□□□□□ -2.3
UBR3Q6ZT12 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.71□□□□□ -2.3
UBR3Q6ZT12 AP003497.1-201ENST00000528472 562 ntBASIC0.71□□□□□ -2.3
UBR3Q6ZT12 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.71□□□□□ -2.3
UBR3Q6ZT12 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
UBR3Q6ZT12 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
UBR3Q6ZT12 RNU6-1243P-201ENST00000364028 107 ntBASIC0.7□□□□□ -2.3
UBR3Q6ZT12 SNORA22-201ENST00000383907 134 ntBASIC0.7□□□□□ -2.3
UBR3Q6ZT12 SNORA22C-201ENST00000384614 134 ntBASIC0.7□□□□□ -2.3
UBR3Q6ZT12 RNA5SP56-201ENST00000410277 118 ntBASIC0.7□□□□□ -2.3
UBR3Q6ZT12 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.7□□□□□ -2.3
UBR3Q6ZT12 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
UBR3Q6ZT12 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.7□□□□□ -2.3
UBR3Q6ZT12 DUXAP8-207ENST00000456786 622 ntBASIC0.7□□□□□ -2.3
UBR3Q6ZT12 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.7□□□□□ -2.3
UBR3Q6ZT12 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.7□□□□□ -2.3
UBR3Q6ZT12 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.7□□□□□ -2.3
UBR3Q6ZT12 OR8K4P-201ENST00000534608 872 ntBASIC0.7□□□□□ -2.3
UBR3Q6ZT12 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.7□□□□□ -2.3
UBR3Q6ZT12 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.7□□□□□ -2.3
UBR3Q6ZT12 AL590410.1-201ENST00000617925 333 ntBASIC0.7□□□□□ -2.3
UBR3Q6ZT12 U6.48-201ENST00000618523 106 ntBASIC0.7□□□□□ -2.3
UBR3Q6ZT12 AC068057.2-201ENST00000624047 895 ntBASIC0.7□□□□□ -2.3
UBR3Q6ZT12 RNU6-1187P-201ENST00000364771 110 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 MIR618-201ENST00000385287 98 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.69□□□□□ -2.3
UBR3Q6ZT12 FGF7P5-201ENST00000441829 291 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 PTENP1-201ENST00000447117 1215 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AL590365.1-201ENST00000450788 243 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AC109927.2-201ENST00000506416 303 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AC098591.2-201ENST00000510152 315 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 MTND5P11-201ENST00000511037 1812 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AL078605.1-201ENST00000603529 500 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 RNU4-23P-201ENST00000362839 140 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 SNORA40.19-201ENST00000390846 128 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 SNORD65-201ENST00000391079 73 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AC018630.2-202ENST00000422992 927 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.69□□□□□ -2.3
UBR3Q6ZT12 MTND4LP3-201ENST00000468320 276 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AF213884.2-201ENST00000510417 903 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AC022447.1-201ENST00000515358 464 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 OR6C7P-201ENST00000547875 934 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AC012435.1-202ENST00000568772 240 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AC011260.1-201ENST00000578420 472 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AC018638.7-201ENST00000605836 1114 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AC092192.1-201ENST00000633154 1018 ntBASIC0.69□□□□□ -2.3
UBR3Q6ZT12 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.68□□□□□ -2.3
UBR3Q6ZT12 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.68□□□□□ -2.3
UBR3Q6ZT12 AC098934.3-201ENST00000430450 190 ntBASIC0.68□□□□□ -2.3
UBR3Q6ZT12 AC104689.1-201ENST00000473356 768 ntBASIC0.68□□□□□ -2.3
UBR3Q6ZT12 RNA5SP165-201ENST00000517142 115 ntBASIC0.68□□□□□ -2.3
UBR3Q6ZT12 AC036111.3-201ENST00000526389 112 ntBASIC0.68□□□□□ -2.3
UBR3Q6ZT12 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.68□□□□□ -2.3
UBR3Q6ZT12 AL133241.1-201ENST00000556832 487 ntBASIC0.68□□□□□ -2.3
UBR3Q6ZT12 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.68□□□□□ -2.3
UBR3Q6ZT12 AC074051.3-201ENST00000570238 358 ntBASIC0.68□□□□□ -2.3
UBR3Q6ZT12 MIR3126-201ENST00000577443 74 ntBASIC0.68□□□□□ -2.3
UBR3Q6ZT12 AL669831.4-202ENST00000590817 238 ntBASIC0.68□□□□□ -2.3
UBR3Q6ZT12 NIFKP6-201ENST00000598115 845 ntBASIC0.68□□□□□ -2.3
UBR3Q6ZT12 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.68□□□□□ -2.3
UBR3Q6ZT12 MIR7157-201ENST00000635801 60 ntBASIC0.68□□□□□ -2.3
UBR3Q6ZT12 OR5H6-203ENST00000642105 978 ntBASIC0.68□□□□□ -2.3
UBR3Q6ZT12 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
UBR3Q6ZT12 TPTE2P4-201ENST00000258589 1605 ntBASIC0.68□□□□□ -2.3
UBR3Q6ZT12 AC073544.1-201ENST00000600110 1595 ntBASIC0.68□□□□□ -2.3
UBR3Q6ZT12 HMGN2P39-201ENST00000398005 273 ntBASIC0.67□□□□□ -2.3
UBR3Q6ZT12 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.67□□□□□ -2.3
UBR3Q6ZT12 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.67□□□□□ -2.3
UBR3Q6ZT12 RNU7-23P-201ENST00000459465 62 ntBASIC0.67□□□□□ -2.3
UBR3Q6ZT12 UBL5P1-201ENST00000507979 193 ntBASIC0.67□□□□□ -2.3
UBR3Q6ZT12 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
UBR3Q6ZT12 AC023932.2-201ENST00000603176 175 ntBASIC0.67□□□□□ -2.3
UBR3Q6ZT12 AC099842.1-201ENST00000619919 596 ntBASIC0.67□□□□□ -2.3
UBR3Q6ZT12 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.67□□□□□ -2.3
UBR3Q6ZT12 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
UBR3Q6ZT12 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.67□□□□□ -2.3
UBR3Q6ZT12 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
UBR3Q6ZT12 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
UBR3Q6ZT12 RNU6-1074P-201ENST00000383995 104 ntBASIC0.67□□□□□ -2.3
UBR3Q6ZT12 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
UBR3Q6ZT12 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.67□□□□□ -2.3
UBR3Q6ZT12 AC092047.1-201ENST00000424997 240 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms