Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 HMGN1P11-201ENST00000508668 303 ntBASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 SNORA74D-201ENST00000516404 141 ntBASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 SNORA40.14-201ENST00000516543 86 ntBASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 AC100870.1-201ENST00000522035 505 ntBASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 CYCSP27-201ENST00000527643 293 ntBASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 RAC1P9-201ENST00000604990 392 ntBASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 AL359547.2-201ENST00000615810 418 ntBASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CNKSR3Q6P9H4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 AC138393.1-203ENST00000327086 343 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 Y_RNA.151-201ENST00000363566 112 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 RNY3P11-201ENST00000364153 102 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 RNA5SP72-201ENST00000364442 117 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 U1.1-201ENST00000384101 164 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 RNU6-1093P-201ENST00000391194 107 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 PTMAP5-201ENST00000393073 333 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 MTCO2P33-201ENST00000402100 465 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 RPS29P4-201ENST00000414733 161 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 UBE2FP1-201ENST00000416536 447 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 AC244098.2-201ENST00000422068 99 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 FABP5P13-201ENST00000452144 328 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 RPL21P11-201ENST00000461458 483 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 AL133162.1-201ENST00000463228 453 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 AC084198.1-201ENST00000477747 402 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 RNU6-111P-201ENST00000517179 105 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 AL670379.6-201ENST00000603753 252 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 AL031176.1-201ENST00000604554 466 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 AL670379.1-201ENST00000604752 252 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 AL670379.5-201ENST00000605253 252 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 AL670379.8-201ENST00000605353 252 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 AL158032.1-201ENST00000605401 106 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 AL670379.7-201ENST00000605823 252 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 U3.45-201ENST00000607547 219 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 AC073346.2-201ENST00000624724 2058 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 AC008669.1-201ENST00000565823 2178 ntBASIC4.29□□□□□ -1.72
CNKSR3Q6P9H4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 OR56A5-201ENST00000340110 738 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 RNU4-42P-201ENST00000364738 142 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 RNU6-637P-201ENST00000384050 107 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 RNU6-701P-201ENST00000384059 107 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 RNU6-214P-201ENST00000384130 107 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 Y_RNA.518-201ENST00000384552 113 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 Y_RNA.555-201ENST00000384673 110 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 MIR183-201ENST00000384958 110 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AL445529.1-201ENST00000398713 389 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 MIR1271-201ENST00000408537 86 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 RNA5SP111-201ENST00000411386 101 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 RPS23P10-201ENST00000416185 486 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AL035423.1-201ENST00000420331 213 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AL139247.1-201ENST00000422768 325 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 PIGPP3-201ENST00000425307 415 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AL645568.3-201ENST00000433683 316 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AL392103.1-201ENST00000447000 198 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AC133473.1-201ENST00000455173 299 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AC007967.1-201ENST00000455422 1159 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 SNORA25.11-201ENST00000515935 105 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 SNORA70.24-201ENST00000517233 118 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 IGKV2D-23-201ENST00000518179 286 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 CR383656.7-201ENST00000548164 174 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 AL160281.1-201ENST00000605307 311 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 SDR42E1P2-201ENST00000614861 481 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 SNHG22-203ENST00000617833 660 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 SDR42E1P4-201ENST00000620894 481 ntBASIC4.28□□□□□ -1.72
CNKSR3Q6P9H4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms