Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 Y_RNA.623-201ENST00000411128 95 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 AL358075.3-201ENST00000426289 226 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 AL121601.2-201ENST00000438019 707 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 RPL23AP58-201ENST00000440453 469 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 RNU7-167P-201ENST00000459160 62 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 AC087884.1-201ENST00000469738 328 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 RN7SL601P-201ENST00000471221 293 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 AC026784.1-201ENST00000507986 352 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 SNORD19.2-201ENST00000516978 73 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 AC087369.1-201ENST00000520775 996 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 MIR5692A1-201ENST00000580523 69 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 MIR4425-201ENST00000580572 84 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 U6.42-201ENST00000618440 107 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 DUXAP9-208ENST00000622815 614 ntBASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.65□□□□□ -1.83
PPP4R4Q6NUP7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 CDC27P3-201ENST00000635418 1910 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AC093536.2-201ENST00000565257 1406 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 ADAM3A-203ENST00000461344 2157 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 RNA5SP118-201ENST00000410385 109 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AL356095.1-201ENST00000417217 199 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 PRPS1P1-201ENST00000445305 876 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 Y_RNA.654-201ENST00000497848 106 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 SNORA25.17-201ENST00000517184 124 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AF235103.2-201ENST00000525753 346 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 OR8R1P-201ENST00000543943 764 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 MIR4286-201ENST00000580651 93 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AC020895.1-201ENST00000595362 272 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 VN1R80P-201ENST00000597126 338 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 NRBF2P5-201ENST00000603087 788 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AC058791.1-201ENST00000608412 3198 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 AC010889.1-201ENST00000566193 2666 ntBASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.64□□□□□ -1.83
PPP4R4Q6NUP7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 RNU6-82P-201ENST00000363970 107 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 POLHP1-201ENST00000411806 470 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 AL627311.1-201ENST00000431514 115 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 RPS29P7-201ENST00000439662 171 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 RNU7-66P-201ENST00000459469 62 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 RPL31P41-201ENST00000477967 372 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 MTCO2P30-201ENST00000503662 364 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 AL355877.2-201ENST00000603670 358 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 AL645944.1-201ENST00000603857 493 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 MIR6868-201ENST00000611215 58 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 MIR7151-201ENST00000617477 60 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 AC103705.1-201ENST00000619013 241 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 CR392039.5-201ENST00000623201 510 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 CASC19-280ENST00000642102 1351 ntBASIC3.63□□□□□ -1.83
PPP4R4Q6NUP7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 RNU6-283P-201ENST00000364788 107 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 Y_RNA.303-201ENST00000364998 94 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 RNA5SP219-201ENST00000390940 113 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 AL356776.1-201ENST00000406574 447 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 RNA5SP31-201ENST00000411144 127 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 ATG3P1-201ENST00000419507 911 ntBASIC3.62□□□□□ -1.83
PPP4R4Q6NUP7 RPL31P12-201ENST00000422587 358 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 251 ms