Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC092192.1-201ENST00000633154 1018 ntBASIC2.38□□□□□ -2.03
ATL3Q6DD88 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.37□□□□□ -2.03
ATL3Q6DD88 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ATL3Q6DD88 RNU6-1167P-201ENST00000363227 94 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 RNU6-778P-201ENST00000363269 103 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 RNA5SP138-201ENST00000365098 114 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
ATL3Q6DD88 RNU1-73P-201ENST00000383971 164 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 RNU6-278P-201ENST00000390945 109 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.37□□□□□ -2.03
ATL3Q6DD88 AC011233.1-201ENST00000422812 283 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 AL353777.1-201ENST00000425552 326 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 ISCA1P1-201ENST00000426679 387 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.37□□□□□ -2.03
ATL3Q6DD88 AL512286.1-201ENST00000439244 400 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.37□□□□□ -2.03
ATL3Q6DD88 PGBD4P3-201ENST00000440731 581 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 CECR9-201ENST00000453421 199 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.37□□□□□ -2.03
ATL3Q6DD88 RPL37P6-201ENST00000460682 294 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 UBE2DNL-203ENST00000474922 222 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.37□□□□□ -2.03
ATL3Q6DD88 RN7SKP287-201ENST00000516546 266 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 RNU6-678P-201ENST00000516832 109 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 AP006587.4-201ENST00000526053 529 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 AC123904.2-201ENST00000548059 300 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.37□□□□□ -2.03
ATL3Q6DD88 AC023824.2-201ENST00000566185 400 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 AC002984.1-201ENST00000591692 448 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.37□□□□□ -2.03
ATL3Q6DD88 AC098826.3-201ENST00000603823 466 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 AL355598.1-201ENST00000604169 202 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ATL3Q6DD88 AC103710.1-201ENST00000610003 901 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ATL3Q6DD88 AC104010.1-201ENST00000616889 150 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 MIR6852-201ENST00000621699 66 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 AC017037.3-201ENST00000625016 472 ntBASIC2.37□□□□□ -2.03
ATL3Q6DD88 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ATL3Q6DD88 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ATL3Q6DD88 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
ATL3Q6DD88 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
ATL3Q6DD88 U8.14-201ENST00000390843 143 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 SNORD115.1-201ENST00000391109 76 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.36□□□□□ -2.03
ATL3Q6DD88 SNORA11.4-201ENST00000408823 129 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 RNU4-53P-201ENST00000410828 140 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 MORF4L1P6-201ENST00000418771 268 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.36□□□□□ -2.03
ATL3Q6DD88 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.36□□□□□ -2.03
ATL3Q6DD88 RPS27AP14-201ENST00000422868 454 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 AC010099.3-201ENST00000423896 409 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.36□□□□□ -2.03
ATL3Q6DD88 AL356320.1-201ENST00000429616 163 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 MTND5P2-201ENST00000442927 1142 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.36□□□□□ -2.03
ATL3Q6DD88 EEF1B2P7-201ENST00000451177 676 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 FABP5P15-201ENST00000453566 214 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 AC108059.3-201ENST00000456388 214 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 AC098591.2-201ENST00000510152 315 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 AC010486.1-201ENST00000511793 424 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 SCARNA17.1-201ENST00000516211 143 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 SCARNA17.2-201ENST00000516334 143 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 SNORD19.2-201ENST00000516978 73 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 AC107934.1-201ENST00000522215 217 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.36□□□□□ -2.03
ATL3Q6DD88 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.36□□□□□ -2.03
ATL3Q6DD88 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.36□□□□□ -2.03
ATL3Q6DD88 RPS3AP4-201ENST00000555161 764 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 RPS3AP23-202ENST00000574601 686 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 MIR3118-1-201ENST00000581787 76 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 AC093424.1-201ENST00000604999 338 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 AC103710.2-201ENST00000609912 942 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 MIR6840-201ENST00000611937 71 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 SCARNA17.4-201ENST00000614296 143 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 MIR7157-201ENST00000635801 60 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 MIR3199-2-201ENST00000636243 86 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 AC006927.3-201ENST00000638789 384 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 MTND4P27-201ENST00000450813 1354 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 MTND4P35-201ENST00000604257 1375 ntBASIC2.36□□□□□ -2.03
ATL3Q6DD88 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.35□□□□□ -2.03
ATL3Q6DD88 AC010889.1-201ENST00000566193 2666 ntBASIC2.35□□□□□ -2.03
ATL3Q6DD88 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.35□□□□□ -2.03
ATL3Q6DD88 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
ATL3Q6DD88 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ATL3Q6DD88 RNA5SP338-201ENST00000410495 85 ntBASIC2.35□□□□□ -2.03
ATL3Q6DD88 RNU2-49P-201ENST00000410666 184 ntBASIC2.35□□□□□ -2.03
ATL3Q6DD88 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.35□□□□□ -2.03
ATL3Q6DD88 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.35□□□□□ -2.03
ATL3Q6DD88 IFNA11P-201ENST00000446352 526 ntBASIC2.35□□□□□ -2.03
ATL3Q6DD88 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.35□□□□□ -2.03
ATL3Q6DD88 AC128713.1-201ENST00000471495 306 ntBASIC2.35□□□□□ -2.03
ATL3Q6DD88 RPS27AP10-201ENST00000496103 208 ntBASIC2.35□□□□□ -2.03
ATL3Q6DD88 SNORA3.4-201ENST00000515969 96 ntBASIC2.35□□□□□ -2.03
ATL3Q6DD88 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.35□□□□□ -2.03
ATL3Q6DD88 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.35□□□□□ -2.03
ATL3Q6DD88 AC025755.1-201ENST00000521306 278 ntBASIC2.35□□□□□ -2.03
ATL3Q6DD88 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.35□□□□□ -2.03
ATL3Q6DD88 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.35□□□□□ -2.03
ATL3Q6DD88 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms