Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 AC020895.1-201ENST00000595362 272 ntBASIC3.29□□□□□ -1.88
CCDC30Q5VVM6 AC008739.2-201ENST00000597006 317 ntBASIC3.29□□□□□ -1.88
CCDC30Q5VVM6 AC022893.3-201ENST00000607665 437 ntBASIC3.29□□□□□ -1.88
CCDC30Q5VVM6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC30Q5VVM6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC30Q5VVM6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 MIR27B-201ENST00000385129 97 ntBASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 RNU2-39P-201ENST00000410604 198 ntBASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AC080125.1-201ENST00000414888 684 ntBASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AC009414.1-201ENST00000427200 443 ntBASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AC093106.2-201ENST00000428212 385 ntBASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AL592045.1-201ENST00000429867 352 ntBASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 RPS15AP5-201ENST00000436276 388 ntBASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AC093899.1-201ENST00000457984 376 ntBASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AP003122.3-201ENST00000526316 255 ntBASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AC084851.1-201ENST00000529105 249 ntBASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AL356057.1-201ENST00000533798 831 ntBASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AC002064.3-201ENST00000623448 346 ntBASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AC110994.2-201ENST00000635481 492 ntBASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC30Q5VVM6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 MIR449A-201ENST00000362113 91 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 RNU6-169P-201ENST00000365336 107 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 MTND3P17-201ENST00000416968 344 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AL353706.1-201ENST00000436728 494 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 RPL23AP20-201ENST00000447965 421 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AC128713.1-201ENST00000471495 306 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AC126182.1-201ENST00000478134 357 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 RPS29P20-201ENST00000489592 171 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AC117522.1-201ENST00000509821 380 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 RNA5SP320-201ENST00000516263 124 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 SNORA18.6-201ENST00000516792 115 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 MIR4513-201ENST00000581077 86 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AC010620.2-201ENST00000600135 313 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AC245014.2-201ENST00000603689 287 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AC064872.1-201ENST00000604823 1072 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AC246785.4-201ENST00000605374 287 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AL359198.2-201ENST00000611836 194 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AC243829.7-201ENST00000633081 225 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 AC138915.1-201ENST00000565427 1685 ntBASIC3.27□□□□□ -1.89
CCDC30Q5VVM6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 NACAP2-201ENST00000318548 624 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 SNORD116-9-201ENST00000384000 95 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 SNORD116-3-201ENST00000384287 95 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 SNORD116-7-201ENST00000384404 95 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 SNORD116-5-201ENST00000384462 95 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 MIR1302-8-201ENST00000408342 128 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 AC023141.4-201ENST00000412031 328 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 AC096649.2-201ENST00000416186 393 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 RPL23AP30-201ENST00000432419 501 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 BRK1P2-201ENST00000442875 223 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 Z83846.1-201ENST00000446798 265 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 RPS15AP27-201ENST00000449183 343 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 MTND1P27-201ENST00000451117 902 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 RPS15AP34-201ENST00000487776 387 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 SRIP1-201ENST00000489235 288 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 AC109927.2-201ENST00000506416 303 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 RNU6-914P-201ENST00000516749 109 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 AP000873.5-201ENST00000533906 236 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 AC073544.2-201ENST00000601155 540 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 AC013562.2-201ENST00000611632 603 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 AC011939.3-201ENST00000613686 466 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 AL359547.2-201ENST00000615810 418 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 UCA1.1-201ENST00000620952 75 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 Z99571.1-201ENST00000636677 394 ntBASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
CCDC30Q5VVM6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms