Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.87□□□□□ -1.79
VPS53Q5VIR6 AC115115.1-201ENST00000449927 248 ntBASIC3.87□□□□□ -1.79
VPS53Q5VIR6 AL118520.1-201ENST00000450770 291 ntBASIC3.87□□□□□ -1.79
VPS53Q5VIR6 RNU7-180P-201ENST00000459240 63 ntBASIC3.87□□□□□ -1.79
VPS53Q5VIR6 AC010631.1-201ENST00000474150 156 ntBASIC3.87□□□□□ -1.79
VPS53Q5VIR6 HSPE1P6-201ENST00000479457 291 ntBASIC3.87□□□□□ -1.79
VPS53Q5VIR6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS53Q5VIR6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS53Q5VIR6 RNU6-1314P-201ENST00000517139 104 ntBASIC3.87□□□□□ -1.79
VPS53Q5VIR6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS53Q5VIR6 AC087241.2-201ENST00000535801 324 ntBASIC3.87□□□□□ -1.79
VPS53Q5VIR6 AC037471.2-201ENST00000564941 598 ntBASIC3.87□□□□□ -1.79
VPS53Q5VIR6 AF038458.1-201ENST00000588406 262 ntBASIC3.87□□□□□ -1.79
VPS53Q5VIR6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS53Q5VIR6 AC073657.2-201ENST00000605661 303 ntBASIC3.87□□□□□ -1.79
VPS53Q5VIR6 AC008962.1-201ENST00000605729 304 ntBASIC3.87□□□□□ -1.79
VPS53Q5VIR6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS53Q5VIR6 AC009248.2-201ENST00000619826 254 ntBASIC3.87□□□□□ -1.79
VPS53Q5VIR6 AC112487.2-201ENST00000637950 304 ntBASIC3.87□□□□□ -1.79
VPS53Q5VIR6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS53Q5VIR6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS53Q5VIR6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS53Q5VIR6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
VPS53Q5VIR6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS53Q5VIR6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS53Q5VIR6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS53Q5VIR6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS53Q5VIR6 SRP72P2-201ENST00000344851 1979 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 Y_RNA.100-201ENST00000363141 102 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 RNA5SP387-201ENST00000364226 106 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 RNU6-38P-201ENST00000384085 107 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 RNU4-26P-201ENST00000410270 107 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS53Q5VIR6 AC114491.1-201ENST00000416095 246 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 ARL5AP1-201ENST00000418991 388 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 AL645937.1-202ENST00000421799 937 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS53Q5VIR6 AC006946.1-201ENST00000429106 328 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 AL365400.1-201ENST00000431854 640 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 TAAR7P-201ENST00000436141 242 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 AC125238.1-201ENST00000448842 249 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 RNA5SP310-201ENST00000459084 116 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 RNU6-333P-201ENST00000459117 107 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 RPL32P34-201ENST00000486380 400 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 RN7SL504P-201ENST00000494496 287 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 PHBP14-201ENST00000512887 367 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 SNORA31.22-201ENST00000517204 135 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 AC093012.1-202ENST00000549403 582 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 PSMA3P-201ENST00000555485 635 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS53Q5VIR6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS53Q5VIR6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS53Q5VIR6 AC096577.2-201ENST00000611455 153 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 uc_338.5-201ENST00000611839 155 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 MIR6076-201ENST00000617521 113 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS53Q5VIR6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
VPS53Q5VIR6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS53Q5VIR6 API5P2-201ENST00000397055 1498 ntBASIC3.86□□□□□ -1.79
VPS53Q5VIR6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 RNU6-1148P-201ENST00000410992 104 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 NCOR1P3-201ENST00000420479 303 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC018630.2-202ENST00000422992 927 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 MTND1P14-201ENST00000427400 950 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC008850.1-201ENST00000427546 362 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 RPL7L1P10-201ENST00000427790 463 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 SNRPFP3-201ENST00000457792 225 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AL162395.1-201ENST00000457882 422 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 snoU13.22-201ENST00000459428 104 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC007547.1-201ENST00000462177 490 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 RPL21P99-201ENST00000480369 423 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC098591.2-201ENST00000510152 315 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC108078.2-201ENST00000510750 236 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC107953.1-201ENST00000522216 297 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 MIR5680-201ENST00000577577 84 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 YPEL5P2-201ENST00000605553 359 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AL132765.2-201ENST00000610812 351 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC093913.1-201ENST00000614178 329 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC004696.1-201ENST00000614345 607 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS53Q5VIR6 MTND4P35-201ENST00000604257 1375 ntBASIC3.85□□□□□ -1.79
VPS53Q5VIR6 AC005183.1-201ENST00000603687 1979 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms